Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0066 ATGAAAACGGAGGATTTTTGGAGCATGTTTTGTGGGGAATCTAGTTGTTCAGAGACTGGAGGAAAGCCTTGCAGTTATTATGATTTTAAGCTTTTGGCTGATCCTTCAACATGTGTCAACCATTTGCTTGTCATTTGCATTGATGTGTTGCTGCTGCTGCTGATCTTGTTCATTATGATCAAGAATTCCTCATCAAAACCATATCATGGTCTAATCCAAGTGCAAAGATATTCAAATTTGCAGCTATTTTCTGCCATAGCCAATGGTACTCTTGGCTTGGTTCATTTGTGCTTAGGCATTTGGGTTTTAGAGGAGAAATGGAGGAAAACCCAAATTGCTTTTCCTCTTGACTGGTGGTTGCAAGAATTCATTCAGGGATTGACATGGTTGCTAGTCGGTTTAGCAATAAGTCTTCAGCTTAAACACCTTTCAAAAGCATGGTTGAGGCTATTTTCTATTCTAGCCTCCTTAGTTTCTGGTGTTTTTTGTGCTTCATCATTATTCTATGCAATTAGAGGCAGAGAACTTACCCTTAAGGTAGCTTTAGATGTTCTCTCATTTCCAGGGGCATTGTTATTGCTATTATGCACATGTAAGGAATCTAACCATAAGAACACTGACAGAGAAATTGATGAAAGCCTTTATGCCCCTTTAAATGGCAATTCCGATAAAATTGCTTCTATTGATAGTGTAACCCTGTTTGCCAAAGCTGGATTCTTCAATAGGATGTCATTTTGGTGGTTGAACTCATTGATGAAAAGGGGTAAAAAGAATTCACTCCAAGAGGAAGATATCCCAAAGTTGCGGGAGGATGATCGAGCAGAGAGCTGTTATTTGTTGTTTCTAGACCAGTTGAACGGGCATAAACAGAGGGACCCATCGTCACAACCATCAGTTTTGAGGATAATAGTTTTATGCCACTTGAGACAGATTTTGATATCAGGATTCTTTGCGTTGCTTAAGGTACTAGCTGTGTGTTGTGGTCCTTTGCTTCTGAATTCATTTATATTGGTTGCTCAGGGTGACGGGAGTTTCAAATATGAAGGTTTTATATTGGCCATATCACTTTTCTTTGTAAAGATCATAGAATCTTTGTCACAGAGGCAGTGGTATTTTCGCTCTAGACTTATTGGTCTGAAAGTTAGGTCACTACTAACTGCGACCATTTATAAAAAGCAACTTAGACTATCCAATTCTGCTAGATTGACGCACTCCGGTGGTGAGATAATGAATTATGTGACTGTGGATGCTTATAGAATTGGAGAATTTCCCTATTGGTTTCACCAGACTTGGACAACAAGCGTCCAACTATGTATCTCATTAGTAGTACTTATTAATGCTGTTGGGCTAGCGACGATTGCATCACTGGTAGTGGTAGTTATCACTGTGCTTTGCAATACTCCACTTGCAAAGTTACAGCACAAGTTTCAAACCAAACTTATGGTGGCACAAGATGCGAGATTGAAGGCTATTTCTGAGGCTCTAATGAATATGAAGGTACTGAAGTTGTATGCATGGGAAACCAATTTTAAAAAGTCTATAGAAGCATTGCGGAATGTTGAGGTCAAATGGTTGTCAGCAGTGCAATTGCAAAAGGCATACAACACCTTTCTCTTTTGGTCCTCACCTGTTTTGGTCTCAGCTGCTACCTTCGGGGCATGTTACTTTCTTAATGTTCCTTTACGTGCAAACAATGTTTTCACTGTTGTAGCTTCTTTGCGCCTTGTTCAAGATCCTATTAGAACAATCCCTGATGTTGTTGGGGTGGTGATTCAAGCAAAAGTTGCATTTGCCAGGATTACAAAATTCTTGGAGGCACCTGAATTGCAGAACGCAAATGCCAAGAAGGGGTGTTTTAATGACAATGTGAGAGGCTCAATTTTAATCAAGTACGCTGACTTTTCATGGGAAGATAATGTATCACAGCCAACATTGAAGCACATAAATTTGGAGGTTAGACCAAGGCAAAAGGTGGCAATTTGTGGAGAGGTTGGCTCAGGCAAATCAACCCTTTTAGCAGCAATTCTCAGAGAAGTTCCTAATACTCAGGGGGCTATTGAAGTTTATGGGAAGTTTGCCTACGTTTCTCAAACAGCATGGATACAGACAGGTACAATACAAGAAAATATACTGTTTGGATCAGATATGGATCCTCAAAGATATCAAGAAACGCTTCATAGGTCTTCACTAGTGAAGGACCTTGAATTATTTTCCCATGGTGACCTCACGGAAATAGGGGAGAGAGGGGTTAACCTGAGCGGAGGTCAGAAGCAGCGGATTCAACTTGCTCGTGCTCTTTATCAGAATGCTGATATATATCTCTTGGATGATCCATTTAGTGCTGTTGATGCACAAACGGCCACAAGTTTATTTAATGAATACGTCATGGAAGGACTTGCAGGGAAGACAGTCTTGCTTGTGACACATCAAGTTGACTTCCTTCCCGCATTTGACACTGTTTTGTTGATGTCGGAAGGGAAAATCCTGGAAGCTGCTCCTTATCACCATCTGTTGACCTCAAGCCAAGAATTTCAGGATCTTGTCAATGCTCACAAAGAAACCGCGGGTTCTAACCGTCTTGTGGATGTCACTTCTTCCCATAGACCTTCAAATAATGCTGGAGAAATTAAGAAAACATATATGGAACATCAGTTTGAAGCATCACAAGGCGATCAATTAATTAAGAAAGAAGAGAGAGAGAAAGGAGACCAAGGGTTCAAGCCTTATTTACAGTATCTGAATCAGGATAGAGGATATATGTACTTTGCTGTGGGTGCTCTTTCTCACCTTATATTTGTGATTGGCCAGATATTGCAAAACTCATGGATGGCTGCTTATGTTGACAATCCTGAAGTGAGCACTTTGAGATTGATTGTGGTATACTTGTTGATTGGAGTTGTTTCAACAATGTTTTTGTTGACCAGAAGTCTTGTAATAGTTGCTTTGGGCATCCAGTCATCAAAATCCTTATTTTTACAGCTACTGAACTCCCTCTTTCATGCGCCCATGTCGTTTTATGACTCCACACCTTTGGGACGGATACTTAGTAGGGTCTCTTCAGATCTCAGCATTGTCGATCTTGATGTCCCATTTGGCTTTATTTTTGCCGTCGGAGCTACTATCAATTGTTATTCTAACCTTACAGTTTTAGCAGTTGTTACTTGGCAAGTGTTGTTTGTGTCTATTCCAATGATTTATTTTGCAATTCGCTTGCAGAAATATTACTTCGCCACTGCAAAAGAATTGATGCGCATCAATGGCACAACAAAATCATATGTAGCTAATCATCTTGCTGAATCTGTTGCTGGAGCTTTGACAATAAGGGCTTTTGAGGAGGAAGATCGTTTTTTCTTGAAGAATCTTGATTTAATTGATGTTAATGTTAGTCCTTACTTTCACAGTTTTGCTGCAAATGAGTGGTTGATTCAGCGTTTAGAAACAGTCAGTGCAGTTGTCCTTGCTTCTGCGGCACTTTGCATGGTTGTACTTCCACCTGGAACTTTCTCATCTGGTTTTATTGGCATGGCTCTCTCATATGGCCTTTCACTTAATTTGTCCTTGGTATTTTCAATTCAAAATCAATGCAATATAGCAAATTATATAATCTCAGTGGAGAGGCTAAATCAATATATGCATATACCAAGTGAGGCACCAGAAGTGATAGAAGGAAATCGTCCTCCGGTTAATTGGCCAGTTGTGGGAAAAGTTGAAATACATGATTTGCAGATACGATACAGGCCTGATGCACCCCTTGTACTCGGTGGCATCACATGCACATTTGAAGGAGGGAACAAGATTGGTATTGTTGGCAGGACAGGTAGTGGGAAGTCCACTCTTATAGGTGCTTTATTCCGTCTGGTGGAGCCATCAGGTGGAAAAATCATAGTTGATGGCGTAGACATTGCTTCGATTGGACTTCATGACTTGAGGTCACGCTTAGGTATCATACCTCAGGATCCTACTCTTTTTAATGGCACAGTCAGATACAATATGGATCCTTTATCTCAGCACTCTGATCAAGAGATATGGGAGGTTCTTGGGAAGTGTCAGTTGCGAGAGGTTGTCCATGAGAAAGAAGAGGGTTTAGACTCATCGGTTGTGGAAGCTGGAGCAAACTGGAGCATGGGACAACGACAGTTATTCTGCTTGGGGCGTGCTCTTTTGAGGAGAAGTCGAGTATTGGTGCTTGATGAAGCAACTGCGTCAATTGATAATGCAACTGATCTGATTCTACAGAAAACCATTAGGAGTGAGTTTGCAGATTGTACAGTGATCACAGTTGCTCATAGGATACCAACTGTGATGGATTGTACCAAGGTTCTTGCTATTAGTGATGGAAAAATTGTAGAGTATGATGAACCAACAAACTTGATGAAGAGAGAAGGGTCGTTATTTCGGCAGCTTGTGAAGGAATACTGGTCTCATTTTCAGTCTGCAGATTCACATTGA 4449 0.4064 MKTEDFWSMFCGESSCSETGGKPCSYYDFKLLADPSTCVNHLLVICIDVLLLLLILFIMIKNSSSKPYHGLIQVQRYSNLQLFSAIANGTLGLVHLCLGIWVLEEKWRKTQIAFPLDWWLQEFIQGLTWLLVGLAISLQLKHLSKAWLRLFSILASLVSGVFCASSLFYAIRGRELTLKVALDVLSFPGALLLLLCTCKESNHKNTDREIDESLYAPLNGNSDKIASIDSVTLFAKAGFFNRMSFWWLNSLMKRGKKNSLQEEDIPKLREDDRAESCYLLFLDQLNGHKQRDPSSQPSVLRIIVLCHLRQILISGFFALLKVLAVCCGPLLLNSFILVAQGDGSFKYEGFILAISLFFVKIIESLSQRQWYFRSRLIGLKVRSLLTATIYKKQLRLSNSARLTHSGGEIMNYVTVDAYRIGEFPYWFHQTWTTSVQLCISLVVLINAVGLATIASLVVVVITVLCNTPLAKLQHKFQTKLMVAQDARLKAISEALMNMKVLKLYAWETNFKKSIEALRNVEVKWLSAVQLQKAYNTFLFWSSPVLVSAATFGACYFLNVPLRANNVFTVVASLRLVQDPIRTIPDVVGVVIQAKVAFARITKFLEAPELQNANAKKGCFNDNVRGSILIKYADFSWEDNVSQPTLKHINLEVRPRQKVAICGEVGSGKSTLLAAILREVPNTQGAIEVYGKFAYVSQTAWIQTGTIQENILFGSDMDPQRYQETLHRSSLVKDLELFSHGDLTEIGERGVNLSGGQKQRIQLARALYQNADIYLLDDPFSAVDAQTATSLFNEYVMEGLAGKTVLLVTHQVDFLPAFDTVLLMSEGKILEAAPYHHLLTSSQEFQDLVNAHKETAGSNRLVDVTSSHRPSNNAGEIKKTYMEHQFEASQGDQLIKKEEREKGDQGFKPYLQYLNQDRGYMYFAVGALSHLIFVIGQILQNSWMAAYVDNPEVSTLRLIVVYLLIGVVSTMFLLTRSLVIVALGIQSSKSLFLQLLNSLFHAPMSFYDSTPLGRILSRVSSDLSIVDLDVPFGFIFAVGATINCYSNLTVLAVVTWQVLFVSIPMIYFAIRLQKYYFATAKELMRINGTTKSYVANHLAESVAGALTIRAFEEEDRFFLKNLDLIDVNVSPYFHSFAANEWLIQRLETVSAVVLASAALCMVVLPPGTFSSGFIGMALSYGLSLNLSLVFSIQNQCNIANYIISVERLNQYMHIPSEAPEVIEGNRPPVNWPVVGKVEIHDLQIRYRPDAPLVLGGITCTFEGGNKIGIVGRTGSGKSTLIGALFRLVEPSGGKIIVDGVDIASIGLHDLRSRLGIIPQDPTLFNGTVRYNMDPLSQHSDQEIWEVLGKCQLREVVHEKEEGLDSSVVEAGANWSMGQRQLFCLGRALLRRSRVLVLDEATASIDNATDLILQKTIRSEFADCTVITVAHRIPTVMDCTKVLAISDGKIVEYDEPTNLMKREGSLFRQLVKEYWSHFQSADSH 1482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0066 1482 CDD ABC_6TM_ABCC_D1 313 600 IPR044746 GO:0140359
Lal24g0066 1482 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1236 1470 IPR003439 GO:0005524
Lal24g0066 1482 SUPERFAMILY ABC transporter transmembrane region 305 608 IPR036640 GO:0005524|GO:0016021
Lal24g0066 1482 SUPERFAMILY ABC transporter transmembrane region 908 1216 IPR036640 GO:0005524|GO:0016021
Lal24g0066 1482 SMART AAA_5 654 827 IPR003593 -
Lal24g0066 1482 SMART AAA_5 1262 1455 IPR003593 -
Lal24g0066 1482 CDD ABCC_MRP_domain1 627 827 - -
Lal24g0066 1482 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 923 1199 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal24g0066 1482 Gene3D - 622 856 IPR027417 -
Lal24g0066 1482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 621 850 IPR027417 -
Lal24g0066 1482 CDD ABCC_MRP_domain2 1234 1454 - -
Lal24g0066 1482 Gene3D ABC transporter type 1, transmembrane domain 884 1217 IPR036640 GO:0005524|GO:0016021
Lal24g0066 1482 Gene3D ABC transporter type 1, transmembrane domain 287 609 IPR036640 GO:0005524|GO:0016021
Lal24g0066 1482 Pfam ABC transporter 1255 1401 IPR003439 GO:0005524
Lal24g0066 1482 Pfam ABC transporter 645 779 IPR003439 GO:0005524
Lal24g0066 1482 PANTHER ABC TRANSPORTER C FAMILY PROTEIN 75 1482 - -
Lal24g0066 1482 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1226 1469 IPR027417 -
Lal24g0066 1482 ProSitePatterns ABC transporters family signature. 752 766 IPR017871 GO:0005524
Lal24g0066 1482 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 75 1482 - -
Lal24g0066 1482 Pfam ABC transporter transmembrane region 312 575 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal24g0066 1482 Pfam ABC transporter transmembrane region 921 1160 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
Lal24g0066 1482 Gene3D - 1220 1471 IPR027417 -
Lal24g0066 1482 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 629 850 IPR003439 GO:0005524
Lal24g0066 1482 CDD ABC_6TM_ABCC_D2 918 1211 IPR044726 GO:0140359
Lal24g0066 1482 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 312 592 IPR011527 GO:0005524|GO:0016021|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0066 Lal-Chr24 401914 414902 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0066 613 881 Calmodulin-binding Proteins AT2G36910 30.584 5.95e-25 111
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0066 24 401914 414902 Lal24g0066 24 401914 414902 ECH
Lal12g0076 12 489349 496186 Lal24g0066 24 401914 414902 LSH
Lal2g0970 2 6519959 6529892 Lal24g0066 24 401914 414902 PCT
Lal24g0066 24 401914 414902 Lal2g0970 2 6519959 6529892 PCT