Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0049 ATGGGTACTGTCTATGTTGCTGTCGGGAACAACGTTCATAAGACAAGACAACTGTTGGATTGGACCATTCACACGTTCTCTGCCAGACCAATTTGTCTCCTTCATGTTCACCAACCTTACCTCACCGATTCCTTCAACAGGAACCTCTCTGCAAATGAACCAAGTGACCATGCAATGAAGGCGTTCCAGGAGCAAGGAAGTAAAAAAGTGCATGAACTCCTAGACCAATATATTCTCATCCTTAAAAAGCTAAAAGTAAAGGCCAAGATATTGTTGATTGATAAGGATGATATTGAGAAAGGGATTGCAGAAGCTATTGCTCAACACAATATTAGATGGCTTGTAATGGGAGAAGCAACAGATAAATTTAATTTGGGTGAACTGGCTGAGCAAGAGTCCGAGAAAGCTATTACCGTACGTGAACAAGCATTCCTGTCCTGTACTATATGGTTCATTTGCAAAGGAAAACCCATATGTACTAGGGTAGATGATAAACATACATCTGAAGTGGAGACTGCCCCTCTTTTGTTGGTCCTCAATTCAAATAAAGAAGCCAAACAATCAGAGATGATAAATTCAGAATCGTATCCTAATGCATTGAAATATTCAGATTCTGGTGATACGGAAGAGACTGGAAATGTTAGTTCTCAGTGTTCATTGCAATCAAAGTGGTCCTTAAGTAGTTTTGTTGGAAGGTCAAAGTTAACAGATTTGCTGTTTCATGAGGAGGAAAAAGATGAAGTGGAGCTAGCAAGTGAAATAAATAGTAGAGTGGAAAAAACCATCATAGATGCTAAGAGCATGAGACGAAAAGGATTTGGAGTGGTGTTAAAGAGATGGAAAGTGGAAAACAGTACTTTGGAGGATGAAGAATTAGAATGTCTGTGCGCTAAGGAGATAGGTAGAAGAAAAGAAGTTGAAGAACAAATAGTCAGGGTAAAGCAACAAGTACAGGAAATGAAGATTCAGCAAGATGAAATAATGCATGAATTGCAGATGGTCCAAGACCAAAACTCAGCACTTAAAAATCAACTTTCTGAGTCCCAATGTACAGTGACAGAGTTGGAAGAGAAGATCATATTAGCTGTGGACCTCTTGATAAGCTTCAGGGAAAAACGAGATATGCTAAGGATAGAGCATAAAAATGCAGTTAGGAAAGTCAAAGTGCTGAAGGAATTCAGAGAAGCGGATACTAAATTGTCTTATAGGGTAGAATTCCCTACGTTTTCTTTTATAGAGATCAATGAGGCAACTAACGACCTTGACCCATCCTGGAAGATTGGAGAGGGAAGGTACGGAAGTGTTTATAAAGGTCTGCTTTGCAACATGCATGTTGCCATAAAAATGTTACCATCTTATGGAAGTCAGAGCCAATTGGAGTTCCAACGTCAGGTGGAGATTTTGAGCCGGGTTAGACATCCAAACCTGTTGACACCAATTGGAAGCTCTGTAGAGTCTAGGTCCCTGGTGTACGAGTACCTAAACAATGGCAGCCTTGAAAGCCATCTTGTCCTAAAAGATAAGACTTCACTTCCATGGCAAATTCGAGTATCAATTGCTGCTAACATATGCTCTGCTCTTATCTTCCTTCACTACAGTGATCCTTGTATTATCCATGGGAATTTGAAACCTAGCAAGGTTCTCCTTGATGCTAACTTTGTTGCCAAACTTAGTGACGTGGGCATTCCTTGTTTAGTCCAGTGTAGTGCGGATGTAGCAGTCATGACCACAGTATGTAGGAACAAGAATGAAAGTATGGCGTATGTGGATCCAGAGTATCTCGTTACTAGCAAGCTTACACCAGAATCAGATGTGTATTCATTTGGAGTCATATTGTTGCAACTTCTAACAGGAAGACCACTTTTTGGGCTAGTTAGAGACATGAAGTGTGCATTGGAAAGGGACAACCTAAAATCAGTGTTGGACTTTTCTGCTGGGGAGTGGCCGCTATATCAAACTAAACAGCTGGCTTGTTTAGCATTGAGGTGTTGTGAAAAGACTTGGTTGAACAGGCCGGACCTTGTGTCAGAAATCTGGGGTGTTCTTGAACCATTCAGAACTACTTGCGTCAACATGCCACCATATTTGGCTTCTAAGAAACCTCACCACCCTCCTCCTCCTCATTTTCTCTGCCCCATTGTCCAGGAAGTAATGGAAGAACCATACATAGCAGCAGATGGGTATACATATGAAGCAGAGGCAATAAAAGAATGGTTGAATAGTGGTCACAACACTTCCCCCATGACAAACCTTAAGCTTGAACACACAGATTTGGTGCCTAACTATGTGCTACATAATGCAATTCAGGAGTGGCAGCAACTAATATGA 2328 0.4102 MGTVYVAVGNNVHKTRQLLDWTIHTFSARPICLLHVHQPYLTDSFNRNLSANEPSDHAMKAFQEQGSKKVHELLDQYILILKKLKVKAKILLIDKDDIEKGIAEAIAQHNIRWLVMGEATDKFNLGELAEQESEKAITVREQAFLSCTIWFICKGKPICTRVDDKHTSEVETAPLLLVLNSNKEAKQSEMINSESYPNALKYSDSGDTEETGNVSSQCSLQSKWSLSSFVGRSKLTDLLFHEEEKDEVELASEINSRVEKTIIDAKSMRRKGFGVVLKRWKVENSTLEDEELECLCAKEIGRRKEVEEQIVRVKQQVQEMKIQQDEIMHELQMVQDQNSALKNQLSESQCTVTELEEKIILAVDLLISFREKRDMLRIEHKNAVRKVKVLKEFREADTKLSYRVEFPTFSFIEINEATNDLDPSWKIGEGRYGSVYKGLLCNMHVAIKMLPSYGSQSQLEFQRQVEILSRVRHPNLLTPIGSSVESRSLVYEYLNNGSLESHLVLKDKTSLPWQIRVSIAANICSALIFLHYSDPCIIHGNLKPSKVLLDANFVAKLSDVGIPCLVQCSADVAVMTTVCRNKNESMAYVDPEYLVTSKLTPESDVYSFGVILLQLLTGRPLFGLVRDMKCALERDNLKSVLDFSAGEWPLYQTKQLACLALRCCEKTWLNRPDLVSEIWGVLEPFRTTCVNMPPYLASKKPHHPPPPHFLCPIVQEVMEEPYIAADGYTYEAEAIKEWLNSGHNTSPMTNLKLEHTDLVPNYVLHNAIQEWQQLI 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0049 775 Gene3D Transferase(Phosphotransferase) domain 1 494 691 - -
Lal24g0049 775 SMART Ubox_2 708 771 IPR003613 GO:0004842|GO:0016567
Lal24g0049 775 Coils Coil 303 358 - -
Lal24g0049 775 ProSiteProfiles Protein kinase domain profile. 421 686 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal24g0049 775 ProSitePatterns Protein kinases ATP-binding region signature. 427 448 IPR017441 GO:0005524
Lal24g0049 775 SUPERFAMILY RING/U-box 702 772 - -
Lal24g0049 775 CDD RING-Ubox_WDSUB1_like 709 750 - -
Lal24g0049 775 Pfam Protein tyrosine and serine/threonine kinase 426 674 IPR001245 GO:0004672|GO:0006468
Lal24g0049 775 PANTHER OS02G0152300 PROTEIN 2 774 - -
Lal24g0049 775 CDD STK_N 3 155 - -
Lal24g0049 775 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 705 774 IPR013083 -
Lal24g0049 775 SUPERFAMILY Protein kinase-like (PK-like) 398 679 IPR011009 -
Lal24g0049 775 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 32 2 774 - -
Lal24g0049 775 Pfam U-box domain 706 772 IPR003613 GO:0004842|GO:0016567
Lal24g0049 775 Gene3D HUPs 3 119 IPR014729 -
Lal24g0049 775 Gene3D Phosphorylase Kinase; domain 1 390 493 - -
Lal24g0049 775 ProSiteProfiles U-box domain profile. 704 775 IPR003613 GO:0004842|GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0049 Lal-Chr24 307858 321921 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0049 32 772 U-box Gene Family AT3G49060 43.506 0.0 575
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lal24g0049 PK_Tyr_Ser-Thr 4.1e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0049 - - gmx:100787938 1028.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0049 24 307858 321921 Lal24g0049 24 307858 321921 ECH