Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0046 ATGGCTCCTAAACAGCCAAGTACGGGTCTTTTTGTTGGATTGAACAAGGGTCACATTGTAACCAAAAGGGAATTGCCTCCACGCCCTTCAGATCGCAAAGGGAAAACAAGCAAGAGGGTGGTCTTTGTCAAGAATCTCATTCGTGAGGTTGCTGGTTTTGCGCCTTACGAGAAGCGTATAACTGAGTTGCTCAAGGTTGGCAAGGATAAAAGAGCACTGAAAGTTGCAAAGAGGAAGCTTGGAACCCACAAACGGGCAAAGAGAAAGCGTGAGGAGATGTCCAGTGTTCTCCGCAAGATGAGGGCTGGTGGTGGAGCAGGTGACAAGAAGAAGTAA 336 0.4792 MAPKQPSTGLFVGLNKGHIVTKRELPPRPSDRKGKTSKRVVFVKNLIREVAGFAPYEKRITELLKVGKDKRALKVAKRKLGTHKRAKRKREEMSSVLRKMRAGGGAGDKKK 111
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0046 111 MobiDBLite consensus disorder prediction 87 111 - -
Lal24g0046 111 PANTHER 60S RIBOSOMAL PROTEIN L36-1-RELATED 1 110 - -
Lal24g0046 111 MobiDBLite consensus disorder prediction 1 36 - -
Lal24g0046 111 ProSitePatterns Ribosomal protein L36e signature. 55 65 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lal24g0046 111 MobiDBLite consensus disorder prediction 79 111 - -
Lal24g0046 111 Gene3D 60S ribosomal protein L36 1 105 IPR038097 -
Lal24g0046 111 MobiDBLite consensus disorder prediction 21 36 - -
Lal24g0046 111 PANTHER 60S RIBOSOMAL PROTEIN L36 1 110 IPR000509 GO:0003735|GO:0005840|GO:0006412
Lal24g0046 111 Pfam Ribosomal protein L36e 8 101 IPR000509 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0046 Lal-Chr24 295699 306770 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0046 7 111 Cytoplasmic Ribosomal Protein Gene Family AT5G02450 85.849 1.19e-60 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0046 K02920 - gmx:100795507 204.527
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal9g0814 9 5889937 5891808 Lal24g0046 24 295699 306770 ECH
Lal24g0046 24 295699 306770 Lal24g0046 24 295699 306770 ECH