Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0045 ATGGAGTTCTTAGGGGTATCTGGGGTTCTTGTTGCGTTAATGACAGCCTTTTTCCTCTTATTGTTCTTCATGCTAACATTTTGTTGGTGTATTTCCCCCATCCTAATACTAAATAAGCTTAAGAGGTGTGGGTTTGGAGGACCAACTCCAATTTTTCCACTCGGAAACATTAAAGAGATGAAAAGAAATAATAGCAATATTGTTCATTCTTCACTTGTGTCCTCTAATCTCACCCATGATATACACTCCACAGTTTTCCCTTACTTTTCAAATTGGCAGAAATCTCATGGTAAAGTGTTCGTGTACTGGCTTGGGACGGAGCCATTTTTGTATGTAGCGGACCCAGAATTCTTGAAGAGAATGTCAGCAGAGGTTGTAGCAAAGAGATGGGGAAAACCAAATGTTTTTAAAATTGATAGAGAGCCCATGTTTGGAAGTGGTTTGGTCATGGTTGAGGGCAACGATTGGGTTCGCCACCGTCACATTATTGCTCCTGCCTTCAATCCCCTTAACATTAAGGTATTGGCAAGCATGATGGTTGAGTCAACAAATAAAATGATAGAGAGATGGGTTACTCAAATAAACTCAGGCAACCTTGAAATCGATGTGGAGAGAGAGGTTATAGCATTAGCAGGAGAGATCATATCAAGAACAACTTTTGGCATGAAAGATGATAATGCTATGGATGTGTTTCACAAATTAAGAGCCTTGCAAGTGACTCTCTTTAAGACCAATAGATATGTAGGGGTACCCTTTGGCAAGTATTTCAACTTCAAGAAAACCCTGGAAGCTAAGAAACTTGGCAAGGAAATCGATCACCTCTTATTGTCTATAATAGAAGGTCGTAAGAATTCACAAAAGGATAATTCTCAACAAGATTTATTAGGATTGTTGTTGCAAGAAAATCATCAGTATGAAAAGGGTGATGGGAAGTTAGGGAAGACATTAACAATAAGAGAAGTGGTTGATGAATGCAAGACCTTCTTCTTTGGTGGCCATGAAACCACAGCACTTGCTATAACATGGACTTTGTTGCTTCTAGCTAAGCATGAAGATTGGCAAAATCAGTTGAGAGATGAGATAAGAGAAGTAGTGGGTAATGACATGCTTCATCTCTCTAATCTTTCTGGTTTAAAGAAGATGAAGTGTGTGATGAACGAAGTTCTAAGACTATACCCACCAGCACCAAATGTGCAAAGGCAAGTAAGAGAAGACATAAAAGTTGATAATTTAAGAGTGCCTAATGGAACAAACTTGTGGATTGACGTGGTAGCAATGCATCACGACAATGAAATATGGGGGAAAGATGCAAATGAGTTCAGACCAGAGAGGTTCATGGATGATATGAATGGAGGGTGCAACCACAAGATGGGGTACTTGTCTTTTGGTTTTGGAGGTAGAATGTGTGTTGGTAGAAACTTGGCATTTATGGAGTACAATATTGTATTAACATTACTTCTATCTAAGTTTAGTTTCAAAGTTTCACCAACTTATCATCATTCACCATCAATAATGCTCTCCCTTAGACCCACTTATGGACTTCCACTCATAGTTCACACCCTTTAA 1566 0.3895 MEFLGVSGVLVALMTAFFLLLFFMLTFCWCISPILILNKLKRCGFGGPTPIFPLGNIKEMKRNNSNIVHSSLVSSNLTHDIHSTVFPYFSNWQKSHGKVFVYWLGTEPFLYVADPEFLKRMSAEVVAKRWGKPNVFKIDREPMFGSGLVMVEGNDWVRHRHIIAPAFNPLNIKVLASMMVESTNKMIERWVTQINSGNLEIDVEREVIALAGEIISRTTFGMKDDNAMDVFHKLRALQVTLFKTNRYVGVPFGKYFNFKKTLEAKKLGKEIDHLLLSIIEGRKNSQKDNSQQDLLGLLLQENHQYEKGDGKLGKTLTIREVVDECKTFFFGGHETTALAITWTLLLLAKHEDWQNQLRDEIREVVGNDMLHLSNLSGLKKMKCVMNEVLRLYPPAPNVQRQVREDIKVDNLRVPNGTNLWIDVVAMHHDNEIWGKDANEFRPERFMDDMNGGCNHKMGYLSFGFGGRMCVGRNLAFMEYNIVLTLLLSKFSFKVSPTYHHSPSIMLSLRPTYGLPLIVHTL 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0045 521 PRINTS E-class P450 group I signature 93 112 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal24g0045 521 PRINTS E-class P450 group I signature 320 337 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal24g0045 521 PRINTS E-class P450 group I signature 340 366 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal24g0045 521 PRINTS E-class P450 group I signature 382 400 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal24g0045 521 PRINTS E-class P450 group I signature 423 447 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal24g0045 521 PRINTS E-class P450 group I signature 459 469 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal24g0045 521 PRINTS E-class P450 group I signature 469 492 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal24g0045 521 PRINTS P450 superfamily signature 331 348 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal24g0045 521 PRINTS P450 superfamily signature 383 394 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal24g0045 521 PRINTS P450 superfamily signature 460 469 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal24g0045 521 PRINTS P450 superfamily signature 469 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal24g0045 521 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 462 471 IPR017972 GO:0005506|GO:0016705
Lal24g0045 521 SUPERFAMILY Cytochrome P450 79 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal24g0045 521 Pfam Cytochrome P450 84 500 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal24g0045 521 Gene3D Cytochrome P450 36 520 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal24g0045 521 PANTHER CYTOCHROME P450 FAMILY 72 PROTEIN 5 516 - -
Lal24g0045 521 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 516 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0045 Lal-Chr24 295653 298120 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0045 1 521 Cytochrome P450 AT5G52400 58.034 0.0 628
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0045 - - gmx:100785284 828.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0045 24 295653 298120 Lal24g0045 24 295653 298120 ECH
Lal24g0045 24 295653 298120 Lal2g0923 2 6201243 6203414 PCT