Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0043 ATGGTGAGTGAGAGGCAGCGTCTTGCTCGTAAGCGATTCAAAGCAGAGCATCCTGAACTCTTCCCAAAACCTGAACCCACTCAGAATAAGAATAAGAAAAAGAAGCCCTTAAACAAAAAGCCAGAACAACTCGGCGTCACTAGTAAACCCTTCAAACCCAATTCCAGAAAACACCCTCTCAGAGTCCCTGGTATGAAGCCTGGTGAAAGCTGTTTCATCTGCAAGGCCAAAGACCACATCGCTAAGTCTTGTCCTGAAAAGGCTCTCTGGGAGAAAAACAAGATATGCTTGCGGTGTAGACGCCGTGGTCATCGAGCCACTAATTGCCCTGAGCTGCAACATGGAACCAATGATCACAAATACTGTTATAATTGTGGCCAAAATGGCCACTCCCTTGCACATTGTCCATACCCTCGTCAACAAGGTGGAACAAAGTTTGCTGAATGTTTTGTCTGTAAGCAACGTGGACACTTGAGTAAAGACTGCCCTCAAAATGCTCATGGTATTTATCCAAAGGGTGGTTGTTGTAAAATATGTGGTGGTGTGACACATTTGGCGAAGGATTGTCCTGACAAAGGGAAGCAAGGATCTGTTGCTGCCAATGGGCCTTATAATATATCAATGGGAGCTGGTGTGAAGGCCAGTGGTAAGGTTACCAAATTTGTGAGTGGGGATGATATTGAAGATGACTTCGTGACAGATGACATAAATAGTGGCGACAAGAACAAGTCCTCAAAGTCGAATGAGGGCGATGTAAAACCAAAGAAGGGTCCTAAAGTTGTAGTCTTTAACTGA 795 0.4478 MVSERQRLARKRFKAEHPELFPKPEPTQNKNKKKKPLNKKPEQLGVTSKPFKPNSRKHPLRVPGMKPGESCFICKAKDHIAKSCPEKALWEKNKICLRCRRRGHRATNCPELQHGTNDHKYCYNCGQNGHSLAHCPYPRQQGGTKFAECFVCKQRGHLSKDCPQNAHGIYPKGGCCKICGGVTHLAKDCPDKGKQGSVAANGPYNISMGAGVKASGKVTKFVSGDDIEDDFVTDDINSGDKNKSSKSNEGDVKPKKGPKVVVFN 264
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0043 264 MobiDBLite consensus disorder prediction 1 62 - -
Lal24g0043 264 Gene3D - 120 169 - -
Lal24g0043 264 ProSiteProfiles Zinc finger CCHC-type profile. 149 164 IPR001878 GO:0003676|GO:0008270
Lal24g0043 264 SMART c2hcfinal6 95 111 IPR001878 GO:0003676|GO:0008270
Lal24g0043 264 SMART c2hcfinal6 70 86 IPR001878 GO:0003676|GO:0008270
Lal24g0043 264 SMART c2hcfinal6 148 164 IPR001878 GO:0003676|GO:0008270
Lal24g0043 264 SMART c2hcfinal6 121 137 IPR001878 GO:0003676|GO:0008270
Lal24g0043 264 SMART c2hcfinal6 175 191 IPR001878 GO:0003676|GO:0008270
Lal24g0043 264 Pfam Zinc knuckle 149 164 IPR001878 GO:0003676|GO:0008270
Lal24g0043 264 ProSiteProfiles Zinc finger CCHC-type profile. 96 111 IPR001878 GO:0003676|GO:0008270
Lal24g0043 264 MobiDBLite consensus disorder prediction 229 264 - -
Lal24g0043 264 ProSiteProfiles Zinc finger CCHC-type profile. 122 136 IPR001878 GO:0003676|GO:0008270
Lal24g0043 264 Gene3D - 64 119 - -
Lal24g0043 264 SUPERFAMILY Retrovirus zinc finger-like domains 120 142 IPR036875 GO:0003676|GO:0008270
Lal24g0043 264 SUPERFAMILY Retrovirus zinc finger-like domains 64 113 IPR036875 GO:0003676|GO:0008270
Lal24g0043 264 MobiDBLite consensus disorder prediction 1 32 - -
Lal24g0043 264 SUPERFAMILY Retrovirus zinc finger-like domains 141 192 IPR036875 GO:0003676|GO:0008270
Lal24g0043 264 PANTHER OS04G0555800 PROTEIN 1 264 - -
Lal24g0043 264 MobiDBLite consensus disorder prediction 234 256 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0043 11 192 C2H2 Transcription Factor Family AT5G20220 26.761 5.18e-07 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0043 - - lang:109354628 464.151
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0043 24 287033 289660 Lal24g0043 24 287033 289660 ECH