Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0037 ATGAATTTTATTTTATGTGCACATGCTATTATTTATCCTTCTTGTGTTGCTGATGAGACTATTGTGCAGCCAAGGAAAATGGAGGGTCATACTGACATGGGTCTCATTGGTGAAAACTTTGATACTGGTTTGACGGGGAGGATGAGGGATGATGAGTATGAAAGCCGTTCAGGAAGCGATAATTTTGATGGCGCTTCTGGTGATGATCAGGATGCTGGTGATGATCATCCAAAAAGGAAAAAGAGATATCATAGACACACTCCTCACCAAATTCAAGAGCTTGAATCTTTCTTCAAGGAGTGTCCCCATCCCGATGAAAAGCAAAGGTTGGATCTTAGTAAGAGGCTGGGCCTGGAGAATAAGCAAGTCAAATTCTGGTTTCAGAATCGAAGAACCCAAATGAAGACTCAACTGGAACGCCATGAAAACATAATGCTTAGACAGGAAAATGAGAGGCTTAGAGCTGAGAACAATATGATAAAAGATGCCATGTCAAACCCAGTATGTAACAGTTGTGGTGGCCCAGCCCTTCCTGGCCAAATTTCATTCGAGGAGCACCAGATTAGAATTGAAAATGCTCGACTAAAGGACGAATTGACTCGTATAGTTGCCTTAACAAACAAGTTTCTCGGCAAGCCGATCTCATCATTGAGCAGTCCGATGTCTCTCTCCGCTGCAAATTCTGGTCTAGAACTTGGAATTGGAATGAAGGGGATTGGTGGTTCAAGCAATGTTGGCACTCCCTTACCAATGGGACTTGATTTGGGAGATGGATTCTTGACCTCTCCACCTGCAATACCTGGGATTAGATCACCAATGGGATTGTTGGGAAATGATGCACAACTTGAGAGGTCTATGTTTATAGACCTTGCTTTGGCCGCAATGGAGGAATTAATTAAGATGGCTCAAGCAGATAGCCCTCTTTGGATTAAGAGTTTGGATGGCGAGAAGGAAGTGCTGAACCATGAGGAGTATGCAAGGTTGTTTTCTCCAAAACCTGCTGGTTATGCAATTGATGCTACAAGAGAAACTGGGATAGTAATCATTAACAGTTTAGCGCTTATTGAAACATTAATGGACGCGAATCGATGGGCGGAGATGTTTCCATCTATTATTGCTAGAGCTGTGCCCCTTGATGTTATAACTAATGGCATGGGTGGAACCAGAAATGGCGCTTTACTATTGATGCATTCTGAGGTTCAATTGCTTTCACCACTTGTTCCCATTCGTCAAGTACGATTCCTTCGGTTCTGCAAGCAGCATGCAGAAGGTGTATGGGCTGTGGTTGATGTTTCTGTTGAGATTGGCCGAGATGCTGCCAACACACAGTTCATGACCTGTAGGAGGCTTCCTTCTGGCTGTGTAGTGCAGGATATGCCCAATGGTTACTCCAAGGTTACTTGGGTTGAGCATTGGCATTATGATGAGAGTGTTGTGCACCAACTCTATCGCCCATTGCTTAATTCTAGCATTGGATTTGGAGCTCATCGATGGATCGCTACGCTCCAAAGACAGTGTGAATGCTTGGCGATCCTTATGTCCTCTATCACAAGTGATGATCACACAGCTTTGAGCCAGGCTGGCCGGAGAAGCATGTTGAAGCTGGCACAACGCATGACCAGTAACTTCTGTTCTGGGGTTTGTGCTTCATCGGCTCACAAGTGGGAAAGCCTTCCTGTGGTGACTTTGGGTGATGACATGAGGGTGATGACAAGGAAGAATGTTGATGACCCAGGTGAGCCTCCTGGGATTGTGCTCAGTGCTGCAACTTCTGTTTGGATGCCGGTGTCACAGCAAAAGTTGTTCAACTTTCTGCGCAATGAACAACTCAGAAGTGAATGGGATATTTTGTCAAATGGTGGACCAATGCAGGAGATGGTCCACATTGCCAAAGGACAAGGTCATGGAAATTGTGTTTCTCTCCTTCGTGCTAGTGCTGTTAATGCCAATGATAGCAGCATGCTGATTCTGCAAGAAACATGGACGGATTCTTCGTGCTCAGTGGTAATATATGCACCAGTTGATGTGCAATCCTTGAATGTGGTGATGAGTGGAGGAGATTCAGCATATGTTGCACTCTTGCCTTCCGGCTTCGCCATCCTTCCTGACTGTCAATCCTCCAGGTATAGCAGGTCGAACAATAGTTGCAATGGGAATATACCGAAGGGTGGTGGCGGCGATGATGAAGGTGGAAGCTTGCTGACGGTTGGGTTCCAAATTCTGGTGAATAACCTCCCAACGGCGAAGCTGACAATGGAGTCAGTTGATACTGTGAATAACCTCATATCATGCACTATTCATAAGATCAAAGGTGCCCTCAGAGTTGCATGA 2331 0.4526 MNFILCAHAIIYPSCVADETIVQPRKMEGHTDMGLIGENFDTGLTGRMRDDEYESRSGSDNFDGASGDDQDAGDDHPKRKKRYHRHTPHQIQELESFFKECPHPDEKQRLDLSKRLGLENKQVKFWFQNRRTQMKTQLERHENIMLRQENERLRAENNMIKDAMSNPVCNSCGGPALPGQISFEEHQIRIENARLKDELTRIVALTNKFLGKPISSLSSPMSLSAANSGLELGIGMKGIGGSSNVGTPLPMGLDLGDGFLTSPPAIPGIRSPMGLLGNDAQLERSMFIDLALAAMEELIKMAQADSPLWIKSLDGEKEVLNHEEYARLFSPKPAGYAIDATRETGIVIINSLALIETLMDANRWAEMFPSIIARAVPLDVITNGMGGTRNGALLLMHSEVQLLSPLVPIRQVRFLRFCKQHAEGVWAVVDVSVEIGRDAANTQFMTCRRLPSGCVVQDMPNGYSKVTWVEHWHYDESVVHQLYRPLLNSSIGFGAHRWIATLQRQCECLAILMSSITSDDHTALSQAGRRSMLKLAQRMTSNFCSGVCASSAHKWESLPVVTLGDDMRVMTRKNVDDPGEPPGIVLSAATSVWMPVSQQKLFNFLRNEQLRSEWDILSNGGPMQEMVHIAKGQGHGNCVSLLRASAVNANDSSMLILQETWTDSSCSVVIYAPVDVQSLNVVMSGGDSAYVALLPSGFAILPDCQSSRYSRSNNSCNGNIPKGGGGDDEGGSLLTVGFQILVNNLPTAKLTMESVDTVNNLISCTIHKIKGALRVA 776
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0037 776 CDD homeodomain 79 137 IPR001356 GO:0003677
Lal24g0037 776 SUPERFAMILY Bet v1-like 535 770 - -
Lal24g0037 776 Gene3D - 67 153 - -
Lal24g0037 776 ProSiteProfiles 'Homeobox' domain profile. 77 137 IPR001356 GO:0003677
Lal24g0037 776 MobiDBLite consensus disorder prediction 38 87 - -
Lal24g0037 776 Coils Coil 131 166 - -
Lal24g0037 776 PANTHER HOMEOBOX LEUCINE ZIPPER PROTEIN 23 774 - -
Lal24g0037 776 Pfam Homeodomain 80 135 IPR001356 GO:0003677
Lal24g0037 776 ProSitePatterns 'Homeobox' domain signature. 112 135 IPR017970 GO:0000981|GO:0006355
Lal24g0037 776 MobiDBLite consensus disorder prediction 44 58 - -
Lal24g0037 776 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 23 774 IPR042160 -
Lal24g0037 776 Pfam START domain 290 508 IPR002913 GO:0008289
Lal24g0037 776 CDD START_ArGLABRA2_like 284 507 - -
Lal24g0037 776 SMART HOX_1 78 141 IPR001356 GO:0003677
Lal24g0037 776 SUPERFAMILY Bet v1-like 282 508 - -
Lal24g0037 776 SMART START_1 289 508 IPR002913 GO:0008289
Lal24g0037 776 SUPERFAMILY Homeodomain-like 65 137 IPR009057 -
Lal24g0037 776 ProSiteProfiles START domain profile. 280 511 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0037 Lal-Chr24 248883 255462 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0037 27 773 Homeobox Transcription Factor Family AT3G61150 60.000 0.0 887
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Lal24g0037 START 6.2e-48 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0037 K09338 - gmx:100785102 1273.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal13g0030 13 203175 209237 Lal24g0037 24 248883 255462 LSH