Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0036 ATGGGATTTCTCAGGCGACTTTTCGGCGCCAAAAAAACAACTCAATCCAAATCCGGTAAGGAAAATAAAAGAAGATGGAGCTTCTCCAAACACACCAACACTCACAATTCTCTTCCTCCGCCATCCTCCACCATCAACCACTTTCACCCCACTAACCATGCTATCGCCGTTGCCGCCGCTACCGCTGCTGTCGCAGAAGCAGCTATCGCTGCCGCCGAGGTAGTTAGACTCACAAATTATAATACCAGGCCCACTACTACGACGGTGCATGTCAGCCGGCGGAGGTGGGCGGAAGAAACTGCCGCCATTAAAATACAATCCTTGTTTCGCGGTTACTTGGCAAAGAGGGCATTGAGAGCACTTAAAGCATTGGTGAAGTTACAAGCATTGGTGAGGGGACACATTGTGAGAAAGCAAACTGCAGATATACTCAGACGCATGCAAACATTGGTGCGACTGCAGGCCCAGGCACGTGCTACTCGTGTGCATTCATCAGATAACGTGCATTCTTTCAAGGCTTCACTTTCTCATTACCCTGTCCCTAAAGAATATGAGCACCCACTTCATGCCTATAGTACAAAATTTGATGGATCTTCAATCCTCAAGAGATGTAGTTCCAATGCAAATTTTAGGAACATTGACTCAGAGAGAAGGCAATTTGATTCAAATTGGTTAGATCATTGGATGGAAGAAAATATGTGTAGCCAAACAAGAAATACTTTGAAAAATGGACACCTTGATGATGAGAAGAGTGACAAGATTCTTGAAGTAGATACTTGGAAGCCAAATTTCAAGTCTCACCATGCTGGTGGTAGCTCCTTTCAGACATCACAACACTATTATAACTTGAGTTCTGATTACAACAATAATAATAAGAGCTTTATGGCATATGAGTCTTCTCCATCAAAACGTTCAACTAAAGCACTTAATCAAAGTCTGTCATCAAGGGAGGTGTTACAGTTAAGCTCTTTGAAGTTACACAAAGCAAAAGAAGAGTTAGCTTCCAGAACAAGTAATAATAGTCCACAAACATTTTCCGCCTCTTCTAAAAGTGGTGCAAGGAGAGGACCATTTACTCCTACAAGAAGTGAGTGTTCATGGGGTTACTTCAGTGAGTACATGGGTTACCCCAATTACATGGCGAACACTGAATCTTCTAGAGCGAAGGTTAGATCACAAAGTGCACCAAGGCAAAGGTTGGAGTTTGATAGATATGGTTCTGGTTCTACCAAGAGGTTTGTTCAGGGTCTTTGGGATGTAGGGCCTAATAATTCAGACAGGTATTCTGATTTATGA 1296 0.4298 MGFLRRLFGAKKTTQSKSGKENKRRWSFSKHTNTHNSLPPPSSTINHFHPTNHAIAVAAATAAVAEAAIAAAEVVRLTNYNTRPTTTTVHVSRRRWAEETAAIKIQSLFRGYLAKRALRALKALVKLQALVRGHIVRKQTADILRRMQTLVRLQAQARATRVHSSDNVHSFKASLSHYPVPKEYEHPLHAYSTKFDGSSILKRCSSNANFRNIDSERRQFDSNWLDHWMEENMCSQTRNTLKNGHLDDEKSDKILEVDTWKPNFKSHHAGGSSFQTSQHYYNLSSDYNNNNKSFMAYESSPSKRSTKALNQSLSSREVLQLSSLKLHKAKEELASRTSNNSPQTFSASSKSGARRGPFTPTRSECSWGYFSEYMGYPNYMANTESSRAKVRSQSAPRQRLEFDRYGSGSTKRFVQGLWDVGPNNSDRYSDL 431
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0036 431 MobiDBLite consensus disorder prediction 387 406 - -
Lal24g0036 431 Gene3D - 98 148 - -
Lal24g0036 431 PANTHER CALMODULIN-BINDING PROTEIN 1 427 - -
Lal24g0036 431 ProSiteProfiles IQ motif profile. 122 149 IPR000048 GO:0005515
Lal24g0036 431 ProSiteProfiles IQ motif profile. 98 126 IPR000048 GO:0005515
Lal24g0036 431 MobiDBLite consensus disorder prediction 331 359 - -
Lal24g0036 431 SMART iq_5 97 119 IPR000048 GO:0005515
Lal24g0036 431 SMART iq_5 120 141 IPR000048 GO:0005515
Lal24g0036 431 MobiDBLite consensus disorder prediction 335 356 - -
Lal24g0036 431 Pfam Protein of unknown function (DUF4005) 342 403 IPR025064 -
Lal24g0036 431 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 78 141 IPR027417 -
Lal24g0036 431 MobiDBLite consensus disorder prediction 1 44 - -
Lal24g0036 431 Pfam IQ calmodulin-binding motif 101 119 IPR000048 GO:0005515
Lal24g0036 431 Pfam IQ calmodulin-binding motif 122 139 IPR000048 GO:0005515
Lal24g0036 431 PANTHER IQ-DOMAIN 5-RELATED 1 427 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0036 Lal-Chr24 241532 245748 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0036 1 418 IQD Protein Family AT5G62070 42.857 3.75e-62 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0036 - - gmx:100785181 477.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal2g0903 2 6002308 6013151 Lal24g0036 24 241532 245748 PCT
Lal1g0810 1 5554104 5559812 Lal24g0036 24 241532 245748 PCT
Lal24g0036 24 241532 245748 Lal2g0903 2 6002308 6013151 PCT
Lal24g0036 24 241532 245748 Lal1g0810 1 5554104 5559812 PCT