Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0027 ATGTCTAAGATTACAATCACTTCAATGGAAAAGATGGGTTGCATGCTAACAAGCTTTCTTCTCTTGAGTATAGTCTTAACCTCAAATGCTCAACTCGTCAAGAAGACTTATATCATTCAAATGGACAAGTCAGCAATGCCAAACACCTTCTCCAATCACCTTGAATGGTATTCATCAAAAGTTCAATCAGTACTTTCCAAATCAGTAGAATCTGAGATGGACAATGAAGACAGGATAATCTACACCTACCAAACTGCTTTTCATGGACTGGCTGCCAAATTGAGCCAAGAAGAAGCTGAGAAGCTAGAATCATCACAAGGTGTTGTGGCCATATTCCCTGAAACTAAGTATGAGTTACACACAACAAGAAGTCCAACTTTCCTTGGTCTTGAAACACTGCATCATCATTCCACTAATAAAATCTGGTCAAAAAATTTAGTTGACCATGATGTTATAGTTGGAGTGTTAGACACTGGGATTTGGCCAGAGAGTGAAAGCTTCAATGACACAGGTTTGAGAGAAGTACCTTCTCACTGGAAAGGTGCATGTGAAACTGGAAGAGGCTTCAGAAAAAACCACTGCAATAAGAAGATTGTAGGGGCAAGAATATTCTACCATGGATATGAAGCAGCAACAGGAAAATTTGATGATCAAACAGACTACAAATCTCCAAGAGATCAAGATGGTCATGGCACTCACACCGCAGCTACTGTTGCTGGATCTCCAGTGCATGGTGCTAACCTTCAAGGCTATGCTTATGGCACAGCAAGAGGAATGGCACCAGGTGCAAGAATTGCAGCTTATAAAGTGTGCTGGACTGGTGGATGCTTCAGCTCAGATATTCTATCAGCTGTTGATAAAGCTGTAGCTGATGGAGTGAATGTTTTGTCCATTTCCTTAGGTGGTGGAGTCTCCTCTTATTACCATGATAGTTTATCCGTGGCTGCATTTGGAGCAATGGAGAAGGGTGTTTTTGTTTCATGCTCAGCTGGAAATGCAGGACCTGACCCTGCAAGCCTCACAAATGTGTCACCTTGGATCACCACAGTTGGAGCCAGCACAATGGATAGGGATTTTCCTGCATATGTTAAGCTTGGGAATGGCACAAAGATCACTGGAGTCTCACTCTATAAAGGGAAAAACATGTTACAATTTAAGAAACAATATCCTTTGATATACATGGGAAGTAGCTCCACCAGTCCTGATCCAAGATCTTTGTGCTTGGAAGGGACTTTAGATCCCAAAAAAGTCTCAGGAAAGATTGTGATTTGTGATAGAGGGATTAGTCCAAGGGTGCAGAAGGGTCAGGTGGTGAAAAATGCTGGAGGATCAGGAATGATTCTTACAAACACTGCAGCTAATGGAGAGGAGCTTGTTGCTGATTGTCACCTCATTCCAGCAGTTGCAATAGGAGAGAAAGAAGGTAAAGAACTAAAAAATTATGTGCTGACAAGTAAAAAAGCTACTGCTTCTCTAGCTTTTTTGAACACAAGGTTGGGAATTAGACCATCTCCTGTAGTAGCAGCATTTTCATCAAGAGGGCCTAATTTTCTCACCCTTGAGATTCTGAAGCCCGATGTGGTTGCTCCTGGTGTGAACATTCTTGCTGCTTGGAGTGGAGTCATTGGTCCATCAAGTTTACCTACAGATAATAGGAGAGTTAAATTCAATATACTTTCTGGAACTTCAATGTCATGTCCACATGTAAGTGGCATTGCAGCATTGCTCAAGTCTAAGCATCCAGAATGGAGTCCAGCTGCTATAAAATCTGCTTTGATGACAACAGCTTACGTTCATGACAATACCATCAAGCCTCTTAGGGATGCTTCAACTGCTGAAACTTCAACTCCTTATGATCATGGTGCTGGCCACATTAACCCTACAAGAGCTCTTGATCCAGGTTTAGTCTATGACATTGAGCCAAAGGATTACTTTGACTTCCTGTGTACACAGAAACTAACTCCAACACAGTTAGCAGTTTTTGGCAAAAACAGAACTTGTAACCACTCTCTTGCAAGTCCTGGTGATTTGAACTACCCTGCCATATCAGTAGTGTTTCCAGAGAAGAAATCCATTTCATCTTTGACCATTCACAGAACTGCCACTAATGTTGGCCCTCCTGTTTCCAAATACCATGTTATTGTTTCACCATTCAAAGGTGCTTTTCTCAAAGTAGTGCCAGACACATTGAATTTCACTAGAAAATACCAGAAACTATCTTACAAGATTATCTTCACTTCCAAATCTAGGCCAGCAGAACCTGAATTTGGAGGCCTGGTGTGGAAGGATGGTGTGCACAAGGTTAGAAGTCCAATAGTGATTACATATATGGCACCAATATGA 2343 0.4157 MSKITITSMEKMGCMLTSFLLLSIVLTSNAQLVKKTYIIQMDKSAMPNTFSNHLEWYSSKVQSVLSKSVESEMDNEDRIIYTYQTAFHGLAAKLSQEEAEKLESSQGVVAIFPETKYELHTTRSPTFLGLETLHHHSTNKIWSKNLVDHDVIVGVLDTGIWPESESFNDTGLREVPSHWKGACETGRGFRKNHCNKKIVGARIFYHGYEAATGKFDDQTDYKSPRDQDGHGTHTAATVAGSPVHGANLQGYAYGTARGMAPGARIAAYKVCWTGGCFSSDILSAVDKAVADGVNVLSISLGGGVSSYYHDSLSVAAFGAMEKGVFVSCSAGNAGPDPASLTNVSPWITTVGASTMDRDFPAYVKLGNGTKITGVSLYKGKNMLQFKKQYPLIYMGSSSTSPDPRSLCLEGTLDPKKVSGKIVICDRGISPRVQKGQVVKNAGGSGMILTNTAANGEELVADCHLIPAVAIGEKEGKELKNYVLTSKKATASLAFLNTRLGIRPSPVVAAFSSRGPNFLTLEILKPDVVAPGVNILAAWSGVIGPSSLPTDNRRVKFNILSGTSMSCPHVSGIAALLKSKHPEWSPAAIKSALMTTAYVHDNTIKPLRDASTAETSTPYDHGAGHINPTRALDPGLVYDIEPKDYFDFLCTQKLTPTQLAVFGKNRTCNHSLASPGDLNYPAISVVFPEKKSISSLTIHRTATNVGPPVSKYHVIVSPFKGAFLKVVPDTLNFTRKYQKLSYKIIFTSKSRPAEPEFGGLVWKDGVHKVRSPIVITYMAPI 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0027 780 ProSiteProfiles Serine proteases, subtilase domain profile. 127 631 - -
Lal24g0027 780 Pfam Subtilase family 149 601 IPR000209 GO:0006508|GO:0008236
Lal24g0027 780 Pfam PA domain 389 478 IPR003137 -
Lal24g0027 780 CDD Peptidases_S8_3 117 597 IPR034197 -
Lal24g0027 780 SUPERFAMILY Subtilisin-like 120 635 IPR036852 GO:0004252|GO:0006508
Lal24g0027 780 PRINTS Subtilisin serine protease family (S8) signature 148 167 IPR015500 -
Lal24g0027 780 PRINTS Subtilisin serine protease family (S8) signature 226 239 IPR015500 -
Lal24g0027 780 PRINTS Subtilisin serine protease family (S8) signature 560 576 IPR015500 -
Lal24g0027 780 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 24 120 IPR037045 -
Lal24g0027 780 CDD PA_subtilisin_like 362 492 - -
Lal24g0027 780 Pfam Fibronectin type-III domain 676 774 IPR041469 -
Lal24g0027 780 Pfam Peptidase inhibitor I9 36 120 IPR010259 -
Lal24g0027 780 PANTHER XYLEM SERINE PROTEINASE 1 26 775 - -
Lal24g0027 780 ProSitePatterns Serine proteases, subtilase family, serine active site. 561 571 IPR023828 -
Lal24g0027 780 MobiDBLite consensus disorder prediction 218 238 - -
Lal24g0027 780 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 775 IPR045051 -
Lal24g0027 780 Gene3D Peptidase S8/S53 domain 150 644 IPR036852 GO:0004252|GO:0006508
Lal24g0027 780 Gene3D - 648 777 - -
Lal24g0027 780 Gene3D - 356 499 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0027 Lal-Chr24 188255 190597 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0027 19 780 Subtilisin-like Serine Gene Family AT5G51750 70.298 0.0 1132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0027 - - lang:109354646 1497.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0027 24 188255 190597 Lal24g0027 24 188255 190597 ECH
Lal13g0021 13 134498 136846 Lal24g0027 24 188255 190597 LSH
Lal1g0796 1 5420440 5422767 Lal24g0027 24 188255 190597 PCT
Lal24g0027 24 188255 190597 Lal1g0796 1 5420440 5422767 PCT