Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0023 ATGCCTTTAAGACAAATGAAAGAAAGCTCAGAGCAACACCTTGTGATCAAAACCAATTTGCAGAACCCTACGAGTGCAGTTAAGAAGGCAGAGAAAGGTACCCAAAGTGGAAAAGGTCCACTACCACCTTCACAAGAAAACCAAAGCCAAACTTCACCTCAGGAAAGGAACAAGGGAAGAAGAAGAGGCAGAGGTGGCAGAAAATCTGATCAAGGAGATATTTTTACGAGACCAAGATGCAGGCCTTGCACTATGACAACAACAATAACAAGTAGTGCTGCTGCTGCTGCTGCTACTACTACTACTACTACTGCAAATGGAAATGTTGATAATGGTGACATTAATATGAGTTTTCCTACTTCAAGCAAGTCTTCGAGCTTTGCTCCTAGGCCTGGGTATGGACAAGTTGGAACAAAATGCATTGTTAAGGCTAACCACTTCTTTGCAGAGTTCCCAGACAAGGACTTGAACCACTATGATGTTAGTATTACCCCAGAAGTGTCTTCAAGAAGAGTGAACAGGTCCATCATAGCAGAATTGGTGAGGCTGTACAAAGAGAGTGAGTTAGGGATGAGGCTTCCAGCTTATGATGGCAGAAAAAGTCTGTACACCGCTGGCCACCTTCCCTTTACCTTGAAAGAGTTTAAGATTAACCTTGTCAATGTAAATGAGAATGATGGAGTACATGTCCCCAAAAGGGAAAGAGAATACAAGGTGGTGATCAAGTTTGTTGCAAAGGCAAACTTGCATCATTTAGGACAGTTTCTAGCTGGTAAGCGTCCTGATGGACCACAGGAGGCACTTCAAATCCTTGACATTGTTCTAAGAGAGTTATCAAATAAGAGGTATTGCCCTATTGGGAGGTCCTTCTTTTCACCCGATATTAGAAAACCACAATGCCTTGGAGAGGGATTGGAGTCATGGTGTGGATTTTATCAGAGCATAAGGCCTACTCAGATGGGTCTTTCCCTCAATATTGATATGGCATCTGCTGCATTCATCGAGCCTCTTCCTGTGCTAGAATTTGTTGGTCAGCTATTAGGAAAAGATGTACTGTCAAGGCCATTGTCCGATTCCGATCGCATTAAGATTAAAAAAGGCCTTAGAGGAGTTAAAGTTGAAGTAACACACAGAGGAAGTGTTAGAAGAAAATATCGTGTTTCAGGGTTGACTTCTCAACCAACAAGAGAACTTGTGTTTCCTGTTGATGAGAACTCAACTATGAAGTCAGTAGTTGAATACTTCCAAGAGATGTATGGTTTCACTATTCAATATACTCACCTTCCTTGTCTTCAAGTAGGAAACCAAAAGAAGGCAAACTATCTACCCATGGAGGCCTGCAAAATTGTTGAGGGGCAACGTTATACAAAAAGATTGAATGAGAAGCAAATTACTGCTCTCCTGAAAGTTACTTGCCAGAGACCTCGTGATCGGGAAAATGATATTTTACGGACTGTTCACCATAATGCTTACAATGAAGATCCATATGCAAAGGAATTTGGGATTGAAATCAATGAAAAACTGGCTTCCGTTGAAGCACGAATTCTTCCTGCCCCCTGGCTTAAATATCACGAAAGTGGGAGAGAAAAGAACTGTTTACCCCAAGTTGGTCAGTGGAATATGATGAACAAGAAAATGATTAATGGAATGACTGTCAGCCGGTGGGCATGCATAAATTTTTCGCGGAGTGTGCAAGATAGTGTTGCTCGCACGTTTTGCAATGATCTTGCTCAAATGTGTCAAGTATCTGGCATGGAATTTAATCCAGACCCTGTAATCCCCATCTACAATGCCAAGCCAGAGCAGGTAGAGAAAGCTTTGAAGCATGTTTACCATGTATCAACAAACAAGACTAAAGGAAAAGAATTGGAGCTCTTGTTAGTAATATTGCCTGACAGCAATGGTTCTCTATATGGTGATCTCAAGCGTATTTGTGAAACCGACCTTGGTTTAATTTCACAATGCTGTCTGACAAAGCATGTCTTTAAGATCACTAAACAGTACTTGGCTAATGTGTCTCTGAAGATTAATGTGAAGATGGGAGGTAGAAACACTGTTCTTCTAGATGCTGTAAGTTGCAGAATACCATTGGTTAGTGACATACCAACCATAATATTTGGAGCAGATGTTACTCACCCTGAAAATGGAGAAGATTCTAGTCCCTCTATAGCAGCTGTAGTAGCATCCCAAGACTGGCCTGAAGTGACAAAATATGCCGGTTTAGTGTGCGCTCAAGCTCATAGGCAGGAGCTTATACAAGATTTGTACAAAACTTGGCATGATCCTGTTCGTGGCACAATTAGTGGTGGCATGATTCGAGATTTGTTGGTTTCATTTCGAAAGGCAACAGGACAGAAGCCACAAAGGATTATATTTTACAGGGATGGTGTAAGTGAAGGACAGTTCTACCAAGTTCTACTTTATGAGTTGGATGCAATCCGAAAGGCATGTGCTTCCTTAGAACCAAATTATCAGCCTCCAGTAACTTTCATTGTCGTACAAAAAAGACACCATACTCGGTTGTTCCCTAACAACCACAGGGACAGGAGCAGTACAGATAAGAGTGGGAATATATTGCCCGGGACTGTAGTTGATACTAAAATCTGCCATCCAACAGAATTTGATTTTTATCTCTGTAGTCATGCTGGCATCCAGGGTACAAGTCGGCCTGCTCATTATCATGTTCTATGGGATGAAAACAACTTCACAGCCGATGGAATTCAGTCTTTGACCAACAATCTCTGCTATACATATGCCAGGTGTACACGCTCCGTATCTGTTGTTCCTCCAGCATACTATGCACATTTAGCAGCCTTTCGTGCTCGTTTCTACATGGAACCAGATATGCAAGAGAATGGCTCTACAGGTGGAGGTAATGCTGGCCCTGGTTACAGAACTCGAGCAGCTGGAGAGTGTGGTGTGAAGCCATTGCCAGCATTGAAAGAAAATGTGAAGAGAGTAATGTTTTATTGTTAG 2976 0.42 MPLRQMKESSEQHLVIKTNLQNPTSAVKKAEKGTQSGKGPLPPSQENQSQTSPQERNKGRRRGRGGRKSDQGDIFTRPRCRPCTMTTTITSSAAAAAATTTTTTANGNVDNGDINMSFPTSSKSSSFAPRPGYGQVGTKCIVKANHFFAEFPDKDLNHYDVSITPEVSSRRVNRSIIAELVRLYKESELGMRLPAYDGRKSLYTAGHLPFTLKEFKINLVNVNENDGVHVPKREREYKVVIKFVAKANLHHLGQFLAGKRPDGPQEALQILDIVLRELSNKRYCPIGRSFFSPDIRKPQCLGEGLESWCGFYQSIRPTQMGLSLNIDMASAAFIEPLPVLEFVGQLLGKDVLSRPLSDSDRIKIKKGLRGVKVEVTHRGSVRRKYRVSGLTSQPTRELVFPVDENSTMKSVVEYFQEMYGFTIQYTHLPCLQVGNQKKANYLPMEACKIVEGQRYTKRLNEKQITALLKVTCQRPRDRENDILRTVHHNAYNEDPYAKEFGIEINEKLASVEARILPAPWLKYHESGREKNCLPQVGQWNMMNKKMINGMTVSRWACINFSRSVQDSVARTFCNDLAQMCQVSGMEFNPDPVIPIYNAKPEQVEKALKHVYHVSTNKTKGKELELLLVILPDSNGSLYGDLKRICETDLGLISQCCLTKHVFKITKQYLANVSLKINVKMGGRNTVLLDAVSCRIPLVSDIPTIIFGADVTHPENGEDSSPSIAAVVASQDWPEVTKYAGLVCAQAHRQELIQDLYKTWHDPVRGTISGGMIRDLLVSFRKATGQKPQRIIFYRDGVSEGQFYQVLLYELDAIRKACASLEPNYQPPVTFIVVQKRHHTRLFPNNHRDRSSTDKSGNILPGTVVDTKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENNFTADGIQSLTNNLCYTYARCTRSVSVVPPAYYAHLAAFRARFYMEPDMQENGSTGGGNAGPGYRTRAAGECGVKPLPALKENVKRVMFYC 991
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0023 991 Pfam Piwi domain 626 945 IPR003165 GO:0003676
Lal24g0023 991 SUPERFAMILY Ribonuclease H-like 617 947 IPR012337 -
Lal24g0023 991 Gene3D paz domain 330 455 - -
Lal24g0023 991 Pfam N-terminal domain of argonaute 139 275 IPR032474 -
Lal24g0023 991 MobiDBLite consensus disorder prediction 12 31 - -
Lal24g0023 991 ProSiteProfiles PAZ domain profile. 337 451 IPR003100 GO:0005515
Lal24g0023 991 SUPERFAMILY PAZ domain 331 492 IPR036085 GO:0005515
Lal24g0023 991 Gene3D - 694 991 IPR036397 GO:0003676
Lal24g0023 991 MobiDBLite consensus disorder prediction 1 82 - -
Lal24g0023 991 SMART Piwi_a_2 625 946 IPR003165 GO:0003676
Lal24g0023 991 Pfam Mid domain of argonaute 534 611 IPR032473 -
Lal24g0023 991 Gene3D - 515 688 - -
Lal24g0023 991 MobiDBLite consensus disorder prediction 38 54 - -
Lal24g0023 991 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 57 990 - -
Lal24g0023 991 CDD Piwi_ago-like 495 945 IPR045246 -
Lal24g0023 991 ProSiteProfiles Piwi domain profile. 625 946 IPR003165 GO:0003676
Lal24g0023 991 Pfam PAZ domain 363 467 IPR003100 GO:0005515
Lal24g0023 991 CDD PAZ_argonaute_like 336 450 - -
Lal24g0023 991 SMART DUF1785_2 284 336 IPR014811 -
Lal24g0023 991 Pfam Argonaute linker 1 domain 285 334 IPR014811 -
Lal24g0023 991 PANTHER PROTEIN ARGONAUTE 10 57 990 - -
Lal24g0023 991 Pfam Argonaute linker 2 domain 477 523 IPR032472 -
Lal24g0023 991 SMART PAZ_2_a_3 341 473 IPR003100 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0023 Lal-Chr24 162691 175928 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0023 1 991 Eukaryotic Initiation Factors Gene Family AT5G43810 80.140 0.0 1632
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0023 K11593 - gmx:100816999 1738.01
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0023 24 162691 175928 Lal24g0023 24 162691 175928 ECH