Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0019 ATGAATAATAATAATAATAATAATGAATGTGTTAGATTGTTGAGAAGAGCGATCGATGATAAAGGGATGAAGGGTGGGTTTGAGGGAGGAAGAGGGAGCGAAGTGATGAACGGTGGAGGAGAGGGAGGAAGAGGGAGCGAAGTGGTGAAGGGTGGCGGCGAGGGAGGAAGAGGGAGCGGAGTGATGAAGGGTGACGGAGAGGGAGGAAGAGGGAGCGGGTTCCAATCAATCCTTGAGAAACCACTTGAAGAAATGACAGAGGATGACATATCACAGCTGACAAGAGAAGATTGTAGAAGATTCTTGAAAGAAAAAGGGATGAGAAGGCCTTCATGGAACAAATCTCAAGCTATTCAACAAGTCATTTCACTCAAAGCTTTACTTGAACCCTCCTCTGACCATCATTCCTCCGCCCTCATCCTCCACCATCAGCCTCCGCAACCCACCAGGGATTGTGGAAGTAGTGGTTCAGTTGAGCAGATGACAATTTTCTATTGTGGAAAGGTGAATGTGTATGATGGAGTTTCAGCTGAGAAGGCTAGATCAATCATGCAACTTGCAGCTACTCATCATCATCATCATCATCATCCTTTTATTACAAATCAACCACTCTCTCCTTCTCCTTCTCCTTCTCCTTCCCACCTTCCCTTTCATACTCACCTTCCTCAACCAGATAAGATGCTGGAATATCCTCCACAATATAAGGAAAGAGGGAGCATAGCTCGCGATACTGGTATGGATAGTCAATGGCGCAACAACAACAAAATCCCCATTAGATTGGGTGACCTATATGGATTAGACGAGGGTCAAGCAAGCAGAAAAGTTTCATTGCAGCGTTATCTTGAAAAGCGAAAAGACAGGGGGAGATTTAAGGGAAAGAAAATGAGTGGTATAACATCATCTAACTTGGAGATGTATTTGAACCTTCCAGAGAAGGGTCATGTCTCAAATGGGAATTCAAGCCGTAGTAGCACTAGCTCTCCACCACGACCTACACTCCCTCATCTACCTGACAACCAACTCAAAGTTGCACTTCCCATTGATCTCAATGACAAAGATGTTGAAGAATGCTAA 1074 0.446 MNNNNNNNECVRLLRRAIDDKGMKGGFEGGRGSEVMNGGGEGGRGSEVVKGGGEGGRGSGVMKGDGEGGRGSGFQSILEKPLEEMTEDDISQLTREDCRRFLKEKGMRRPSWNKSQAIQQVISLKALLEPSSDHHSSALILHHQPPQPTRDCGSSGSVEQMTIFYCGKVNVYDGVSAEKARSIMQLAATHHHHHHHPFITNQPLSPSPSPSPSHLPFHTHLPQPDKMLEYPPQYKERGSIARDTGMDSQWRNNNKIPIRLGDLYGLDEGQASRKVSLQRYLEKRKDRGRFKGKKMSGITSSNLEMYLNLPEKGHVSNGNSSRSSTSSPPRPTLPHLPDNQLKVALPIDLNDKDVEEC 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0019 357 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 74 140 - -
Lal24g0019 357 PANTHER PROTEIN TIFY 4B-LIKE ISOFORM X1 156 339 - -
Lal24g0019 357 Pfam Jas motif 270 287 IPR018467 -
Lal24g0019 357 SMART tify_2 154 189 IPR010399 -
Lal24g0019 357 Pfam tify domain 159 188 IPR010399 -
Lal24g0019 357 MobiDBLite consensus disorder prediction 313 329 - -
Lal24g0019 357 MobiDBLite consensus disorder prediction 309 357 - -
Lal24g0019 357 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 156 339 IPR040390 -
Lal24g0019 357 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 74 140 IPR040390 -
Lal24g0019 357 MobiDBLite consensus disorder prediction 24 73 - -
Lal24g0019 357 MobiDBLite consensus disorder prediction 189 223 - -
Lal24g0019 357 ProSiteProfiles Tify domain profile. 154 189 IPR010399 -
Lal24g0019 357 MobiDBLite consensus disorder prediction 203 217 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0019 75 308 Tify Gene Family AT4G14720 42.088 3.70e-52 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lal24g0019 tify 1.1e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0019 - - gmx:100808970 272.707
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0019 24 145223 148465 Lal24g0019 24 145223 148465 ECH