Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0017 ATGGGGGTGAAGAAGAAGAAGAAGAAGAAGCAGCAGCAGATGTTCTTTTCATCTACATATCATCAACATGACTCTTCCACTAACCCTTACCTTACCACATTTCCCTCTTCTTCTACTTACCCTAATACTGCTAATAATACCACCCTTCTTCCTTGTTTCAGTGATCCTCCTCCTCATAAGGTCAATGATTTTGCAACTAATACCTTTCTTCATGATCCACTTGTTGGTCTTGTCCCCTTCATACCCACCACCACTATTACTAATCAAACTCAAACTCATCATCATCATCATCATCATCACACTTCATTCACAGAAGAAGCTGTTGCTAATTTGGCAATGCTTGATAATCAGCAAGATGCTTGCAATAATAATGGCTCCTCCTCCTATGGTTTACTTCACTATGGTTGTAGCACTCCCAATTTTCTGACTCAGAAACCAGCTGCTGCCATAGCAAAGAAGGATAGGCACAGCAAGATTCACACATCACAAGGTTTAAGGGACAGGAGGGTGAGACTTTCAAGTGACATAGCAAGAAAGTTCTTTGATCTTCAGGAGATGTTAGACTTTGACAAACCTAGCAATACCCTTGAGTGGCTATTCACAAAGTCAGAGAATGCAATCAAAGAACTTTCAAGAAGTAAGCATAATAATAATAATGGGTTGGTGGACAACAACACATTTAATGAGAAACCATTGAGTGGCAGTGGTGGCTATAGTTCTAATTCTTCAAAAGGGAAGAAGTCGAAATGGGCACAGAGGGATCAAGATATTTGTACTACCATTCAGACTAAAAAGGAGTCAAGGGAAAAGGCTAGAGCAAGAGCAAGAGAAAGGACTTGCTTCAACAAGATGTGCAACAATAGTACTTGGAGATTAATAGAAGAAAGGTCATCATGCCCTGCAATGTCTTCAAACACTCCACAATATGAGGCTAATTGTGCAAGATGGCCACATCACCAGATGCTTAAACCTTACCCTTCTGAGGACACTCATCACCAACTGGGTAGTGATGCGCCTTTTACTCTTGGAGATGGCTATAATGTTATTGAGGATTCTATTATGATAAAAAGGAACAATATGAAGCCATCTATGATGATGTCTTCTTCTCATAACCAACAAAACCTTGTGATCCCTAAGGAGCCAAGATTCAACAACAATGATGATTACCAATCATTCCCCTATTCCACCCAAAATTGGGATACTAATAATGGCAACTCCAACTTTTCTGGAATAGCCACCATGAATTTATCTACATTTTTCATGAACCAGTGGTAA 1275 0.3976 MGVKKKKKKKQQQMFFSSTYHQHDSSTNPYLTTFPSSSTYPNTANNTTLLPCFSDPPPHKVNDFATNTFLHDPLVGLVPFIPTTTITNQTQTHHHHHHHHTSFTEEAVANLAMLDNQQDACNNNGSSSYGLLHYGCSTPNFLTQKPAAAIAKKDRHSKIHTSQGLRDRRVRLSSDIARKFFDLQEMLDFDKPSNTLEWLFTKSENAIKELSRSKHNNNNGLVDNNTFNEKPLSGSGGYSSNSSKGKKSKWAQRDQDICTTIQTKKESREKARARARERTCFNKMCNNSTWRLIEERSSCPAMSSNTPQYEANCARWPHHQMLKPYPSEDTHHQLGSDAPFTLGDGYNVIEDSIMIKRNNMKPSMMMSSSHNQQNLVIPKEPRFNNNDDYQSFPYSTQNWDTNNGNSNFSGIATMNLSTFFMNQW 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0017 424 MobiDBLite consensus disorder prediction 212 246 - -
Lal24g0017 424 Pfam TCP family transcription factor 151 283 IPR017887 -
Lal24g0017 424 PANTHER TRANSCRIPTION FACTOR TCP FAMILY-RELATED 59 418 - -
Lal24g0017 424 MobiDBLite consensus disorder prediction 212 253 - -
Lal24g0017 424 MobiDBLite consensus disorder prediction 13 28 - -
Lal24g0017 424 ProSiteProfiles R domain profile. 265 283 IPR017888 -
Lal24g0017 424 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 59 418 IPR005333 GO:0003700
Lal24g0017 424 ProSiteProfiles TCP domain profile. 152 210 IPR017887 -
Lal24g0017 424 MobiDBLite consensus disorder prediction 1 28 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0017 Lal-Chr24 115047 117338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0017 145 279 TCP Transcription Factor Family AT1G67260 42.384 4.74e-25 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lal24g0017 TCP 3.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0017 - - lang:109346833 464.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal12g0012 12 92248 93462 Lal24g0017 24 115047 117338 LSH
Lal24g0017 24 115047 117338 Lal9g0768 9 5384301 5387224 PCT