Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal24g0011 ATGATGAAAAGGTCTAAGGTGGTGGTTGATTCAAGTGATTCTGAATCAAGTGATGATGAGTTACCCATCCCTCCTGCTGCCAGGCTTGGCCCTGAAACCATCCGAGTCTGTACTGGTTTGACTGCTCTCCAGCGCCGGCATGAGCGTGGTGGTGGCATTGAAATAAGTGGGAAGAGGGAAAGAGTTGAGCAACTTGGTCGCAATGGGGATGGTATGCTTGAGGAGAATAATGGTTTGGAGGGGAAGGAAATGAAACGTAATAAGTTGGATGTGTTTGATTTCAATGAATACGATGTCATGAGTGCTGAAATTATGAGAATGAGGCATTTTGATAATAACGATGTTGATTTTGGAGGAAGAAGAAGGTTCATGGGAGGAATGCATGCTGCTAGAAGTGGCATTCATACGGAATTTGAAAGTGGTTCAAGCAGAAACATTGTTAATAAGAGAAACTACTCCTACAATGACAGGGCAAGCGGGTTATATCTGGGAGATAGTGTTGACCATGGCAGGTTGAAGATGAACAGTGATGGAGCTAAACGACCTGCACCTTTGTTAAGGGGCAAGCTTAATTCAGACGAATCTGTCAAGATTCAGGGGGAAAATGGTGTTCTGAAAGTCATGGTTAATAAAAAGAAGGTGGGTAAGCTACTAGAACACTCTGATCATCACAAATATGTAGAAAGCCGACATAGTTTGAGGACTGAGCGTACTTCCAAGAGGAATGCTCATATCTGTCCTTCGTCACACTTGGAAACAAAACCTGTTGAGAAACATTGCTTACTTGCTAGGCCAAACAAGAAACAGAAAGCAGCAAGAAAGCAGTTGTCATCTATGGACAGTAAGGGTGGTGAGCGGAATTCAGATAATAGTGACATATCACCGTGTCTTGGAATAAAGAACTCTGAAGTTCGCAAGTCTTCAAAGAAGATAATTTCTGAAGATGAACAGTCTCCTAAGCATGAAAAACTGCCGACTACAAAGACAAAAGAGGTAAAAGTCAAGTGTGGTAGTGTTACAGAGAAACAGAAGCTAAGAGAACAAATACGTGAGATGCTGCTTAATTCCGGTTGGACCATAGACTATCGCCCTCGAAGAAATAGAGATTATCTGGATGCAGTTTACATTCACCCTGGGGGTACAGCTTATTGGTCTATCATCAAGGCCTATGATGCACTTCAAAAGCAATTGAATGATGATGATCATGAAGCCAAGCCCAAAGGTGAGACTTCTTCTTTTGCTCCTATCGCAAATGATGTGCTCAGTCAGTTGACAAGAAACACTCAGAAGAAGATGGAGAAAGACTTGAAGAAGAAGGAAAGAGATGATAAGAAGCGAAGAGATGTTAGTGAGAGTGATAGTGGAGAAGAGCTGCACATCAAAAGATCCTCTGGAAGGAAGCATTGTAAGAATGACATGGATAGTGATAGCAATGAAGAAAAATTAAGCTCATTTCTAAAGCAAGGAAATAAGTCCATGAAAACAAGAATGACTGAAAATGCTGTTACCCGTCATTCAAGTGGTTTAACAGAAAAATCACTGTCTGGAAGTGAGCCTCATCTCCTACGTGATAGGAAAAGTAGAAGGCATGGAAGGTGCACTTTATTAGTTCGTAATTCTAACAAGGGAACAAATTCAGAATTTGGTGACTTTGTTCCATATACTGGCAAAAGAACAGTGCTTTCCTGGTTGATTGACTCTGGGGTAGTACAGTTAAGTCAAAAGGTTCAGTACTGTAAAAGGAAGCGAGTGTTGCTGGAGGGATGGATCACAAGAGACGGCATTCACTGTATCTGCTGTAGTAAGATCCTCACAGTTTCAAAGTTTGAGCTACACGCAGGAAGCAAGTTGCGCCAGCCATATCAAAACATATTTTTGAATTCTGGGGTTTCTCTTCTACAGTGCCAGATAGATGCGTGGAATAGACAAGAAAACTATGAGAAAATTAGTTTCCATTCAGTAGATATTGATGGTGATGATCCAAATGATGATACTTGTGGTATATGTGGAGATGGAGGGGATTTGATTTGTTGTGATGGTTGTCCATCAACATTTCATCTGAACTGCTTGGATATACAGATGCTCCCCCCTGGTGAATGGCATTGTCTAAATTGCACATGTAAATTTTGTGGAATAGCCAGTGTAACTATTAACAAAGAAGATGACGCAGCTGCATATGCCCTACACACTTGTGCTTTATGCAAGAAAAAATGTATTCAAATTCTTCTCTTTTTGCTTGGTTTTGAAGTTCTCTCAATATGCTCTGTGCTTTTGGTCTTTGCTTCCCTTTTTATTTGTTTTTATATACAACTTTCCGTTTTGATAGATCATAACTCTTGTACTAAGGAGGTGGACGCCATTCATACTAACTCCAATATGTCAGGACCTTACTTTTGTGGAAAAGACTGCAAAGAGCTTTTTGAGCACTTGAAGAAGTACCTCAGTACCAAGTATGAACTAGATGCAGGCTTTACGTGGTCTCTTATTCATAGAACAGATGAAGACTCTGAGGCAACTAGTAGGGGAGTTACCCAGAGGGTGGAATGCAACTCCAAGCTAGCTGTCGCACTGACTGTGATGGATGAATGCTTCTTACCGATTATCGATCGGAGGAGTGGGATCAATTTAATCCATAATGTTTTATATAATAGTGGGTCAAACTTCAATCGGTTGAATTATAATGGCTTTTATACTGCTATTTTGGAGCGAGGGGATGAAATAATTTCTGCAGCATCTATCAGGTTCCATGGGACTAAGTTAGTAGAGATGCCCTTCATTGGAACTCGACATATATATAGGCATCAGGGGATGTGCCGCCGGCTTTTTTCTGCTATTGAATTGGCTATTTGCTCTTTAAAGGTTGAGATGCTGGTTATTCCTGCAATTTCTGAACTCATTCAGACATGGATAACAGTTTTTGGCTTCACACATCTTGAGGAATCACTCAGACAAGAAATGAAGTCTCTGAATATGTTGGTCTTCCCTGGCATAGATATGTTACAGAAGCTGCTCATGCAAGAAGGAAAACTTGATGGTAATACAACCACTGCAGATGCTGTATTAGCTACAGGTGCTAAGAGGAAGGTTTTCAATAAGCTCAAAATGGCTGGTAGGTTAGATGTGGATTTCCCTGCTCTGCACAATCCTCGTGGAAGTGATGCTGCTAGTTCAAATCCTACTAATGAGATAAATAGTGAATGTAGTGCTGCTTCTCAAGAGCTAAACAATCAAGTTTTGGTTGCTAGGACCGTGTGCTCTAAATATTGCTCCGAGGAAAGATTATCTGATGATTCTGTTTCAGATAAATGTGTTTCTTCTAGTACTAGTCATGGTGTACTCGAAATGGACAATAAAATAGCAGCAGGTTCTCACGTTGATGATAAATTGCATTTTTCTCCCAAATGTCAAATCAGTTCACAAAATGAAAAATCTGTGACTGGTCCTCCATTAGATTCTACAGATTGCCATGAAATTCCATTTTTGGGTCAGGAAACTGCTTGTTCTAGTCCTGGTTCTACCAAAAACCTGGTTGAACCTATTTCTGACAGAAAATGTCAAATGGCTGCTGATATAAACTGTGATTCATTTGAGCTTGGCATTAATCCATTGTTGGAGTCTCGAGTTGCAGAAAATGCTTTGTCTTCTAAAGAGGTTGATATGAATAACGCCTTTGATGAGGTTCTTGAAGCTTGTCCTTCGGTAAATTTATCTCAAGAGAAAATTACCAAGGAGAATAATGAAAATATAGATGTCTCTGATTCTGTTCTTGGTCATGCTGGTGAGAGTTTCTTGCAAGTAAGATCTGATCTGAATTGTGAAACTGCACAAGAGGGAAAAAAGAATTTACATTTGGGCACAGAAGTTGCTTCAAATAAAATTCATGTTGATGAAACTGGCCTAAATGCACCCAGTCATAGTTTTGAGACTGATCCAATATATGAAAATTTCCAAGGCTAA 3957 0.4013 MMKRSKVVVDSSDSESSDDELPIPPAARLGPETIRVCTGLTALQRRHERGGGIEISGKRERVEQLGRNGDGMLEENNGLEGKEMKRNKLDVFDFNEYDVMSAEIMRMRHFDNNDVDFGGRRRFMGGMHAARSGIHTEFESGSSRNIVNKRNYSYNDRASGLYLGDSVDHGRLKMNSDGAKRPAPLLRGKLNSDESVKIQGENGVLKVMVNKKKVGKLLEHSDHHKYVESRHSLRTERTSKRNAHICPSSHLETKPVEKHCLLARPNKKQKAARKQLSSMDSKGGERNSDNSDISPCLGIKNSEVRKSSKKIISEDEQSPKHEKLPTTKTKEVKVKCGSVTEKQKLREQIREMLLNSGWTIDYRPRRNRDYLDAVYIHPGGTAYWSIIKAYDALQKQLNDDDHEAKPKGETSSFAPIANDVLSQLTRNTQKKMEKDLKKKERDDKKRRDVSESDSGEELHIKRSSGRKHCKNDMDSDSNEEKLSSFLKQGNKSMKTRMTENAVTRHSSGLTEKSLSGSEPHLLRDRKSRRHGRCTLLVRNSNKGTNSEFGDFVPYTGKRTVLSWLIDSGVVQLSQKVQYCKRKRVLLEGWITRDGIHCICCSKILTVSKFELHAGSKLRQPYQNIFLNSGVSLLQCQIDAWNRQENYEKISFHSVDIDGDDPNDDTCGICGDGGDLICCDGCPSTFHLNCLDIQMLPPGEWHCLNCTCKFCGIASVTINKEDDAAAYALHTCALCKKKCIQILLFLLGFEVLSICSVLLVFASLFICFYIQLSVLIDHNSCTKEVDAIHTNSNMSGPYFCGKDCKELFEHLKKYLSTKYELDAGFTWSLIHRTDEDSEATSRGVTQRVECNSKLAVALTVMDECFLPIIDRRSGINLIHNVLYNSGSNFNRLNYNGFYTAILERGDEIISAASIRFHGTKLVEMPFIGTRHIYRHQGMCRRLFSAIELAICSLKVEMLVIPAISELIQTWITVFGFTHLEESLRQEMKSLNMLVFPGIDMLQKLLMQEGKLDGNTTTADAVLATGAKRKVFNKLKMAGRLDVDFPALHNPRGSDAASSNPTNEINSECSAASQELNNQVLVARTVCSKYCSEERLSDDSVSDKCVSSSTSHGVLEMDNKIAAGSHVDDKLHFSPKCQISSQNEKSVTGPPLDSTDCHEIPFLGQETACSSPGSTKNLVEPISDRKCQMAADINCDSFELGINPLLESRVAENALSSKEVDMNNAFDEVLEACPSVNLSQEKITKENNENIDVSDSVLGHAGESFLQVRSDLNCETAQEGKKNLHLGTEVASNKIHVDETGLNAPSHSFETDPIYENFQG 1318
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal24g0011 1318 MobiDBLite consensus disorder prediction 226 250 - -
Lal24g0011 1318 MobiDBLite consensus disorder prediction 281 297 - -
Lal24g0011 1318 CDD PHD2_CHD_II 666 705 - -
Lal24g0011 1318 PANTHER PHD FINGER FAMILY PROTEIN 7 737 - -
Lal24g0011 1318 PANTHER PHD FINGER FAMILY PROTEIN 777 1242 - -
Lal24g0011 1318 MobiDBLite consensus disorder prediction 428 481 - -
Lal24g0011 1318 ProSiteProfiles Zinc finger PHD-type profile. 663 708 IPR019787 -
Lal24g0011 1318 ProSitePatterns Zinc finger PHD-type signature. 666 705 IPR019786 -
Lal24g0011 1318 MobiDBLite consensus disorder prediction 303 329 - -
Lal24g0011 1318 MobiDBLite consensus disorder prediction 399 525 - -
Lal24g0011 1318 MobiDBLite consensus disorder prediction 482 514 - -
Lal24g0011 1318 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 654 745 IPR013083 -
Lal24g0011 1318 SUPERFAMILY FYVE/PHD zinc finger 654 711 IPR011011 -
Lal24g0011 1318 MobiDBLite consensus disorder prediction 1 27 - -
Lal24g0011 1318 SMART PHD_3 665 706 IPR001965 -
Lal24g0011 1318 Pfam Tify domain binding domain 588 638 IPR032308 -
Lal24g0011 1318 MobiDBLite consensus disorder prediction 264 329 - -
Lal24g0011 1318 MobiDBLite consensus disorder prediction 226 243 - -
Lal24g0011 1318 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER PROTEIN 777 1242 - -
Lal24g0011 1318 PANTHER ACYL-COA N-ACYLTRANSFERASE WITH RING/FYVE/PHD-TYPE ZINC FINGER PROTEIN 7 737 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal24g0011 Lal-Chr24 80941 90591 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal24g0011 3 1018 PHD Transcription Factor Family AT4G14920 46.384 0.0 809
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal24g0011 - - mtr:MTR_1g103830 1471.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal24g0011 24 80941 90591 Lal24g0011 24 80941 90591 ECH