LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lal23g1622	ATGGAGGTGTGCAGAAAACAAGTTGAAATAGCATTGTCTGATTCTGAACACAAATTATACAATCACTTGTCAACAATAGCACCTGATAAAATCAGAAATATTCTTGTGTCATTTAGCAATAAAAAAACATATACAGTACTATTCACTTCCCGGCTTGGTTGTAACTTTTTTTGTTTTGCTTCGGTTCTACCAACAAATTTTCCCCTTAATTCTCAACCAGAAATCACAGTAATGGTGGCATTGAGTTCGGAGTCAAAAGATCTACAGCTGATTTTGAGTTTGGATTCTATCCACCTTCCTCTTGTTGGAATATGGTTTGGAAAAATCAGAGAGAGAACACTTGTATGGTACCAAAGTCCTCCTGTGGAAACAAATTCCTTAATCCAACTCACTTCAGAAGGACACCTTGTGGTAACATATTCAAATGGAAGTGTTGCTCATAACATAGACAATGGAGACAGTGCAACTTCTGCTTACATGCAAGATAATGCCAACTTTGTTATGAAAGACTCAAACTTGAGAGTTGTGTGGGAGAGTTTTAGTTCTCCAAGTAACACTATCTTACTAGGCCAAACCTTGAAAGCTGGTCAAATCCTCTATTCTAAGGGGAAAGAATCTTCAAACTATTCAATAGGGAATTTTTTATTGGGACTGCAAAATGATGGGAATTTGGTGCTCAGAGCCTATCAAATATCAATGGTCATCTCCTGGTACGTTTCAACAATAACATCTCAAGATGTGAGTTTGGTGTATAATGTTACTAGTGCTTTATTGTATCTTGTTAGTGACGGTAGCAACGTTTACCATCTAACTAAGAGCACCCCAACCCCAGTAGAGGACTACTATCACAGGGCAACAATAGATGAAAATGGGAATTTTCAGCAATTTACATATCATAAGAGAAATGGCAGCAAGTGGAGCAGGGTTTGGAGAGCCATAGATGATCCCTGCAGAGTGGAAGCTGTTTGTGGTGTGTTTGGCTTGTGCACTTCTCCAGACAAGTCAACTGTGACTGCATTCCATGTAAGAGAAGCAATCACTAGTTATATCCCATTCGATCAAGAAGACGTGTCTAAAGGGTGTCATCCAGAAACGGTAATTAACTATTGTGCAGGACCTTCTATGATGAACTTCAAGCTTCAGGTGATTGATGACACTGATCTCCAATTTTATCCAGACTTTGCTAGGATAAATGATGTTTATTTGGAGGGTTGTAAGAAAACTGTAATGGATGATTGTAATATCATTGCTGCCACTTTTAATGCTTCAACTTCAACATGCGCCAAGAAGAGAATACCATTGCTGAATGCAAGGAAAAGTTCATCTTCAAAGGGACAAAAGGCACTCGTTAAAGTTCCTAACAGTCTTGAATCTAGAACATTACAAGATTCTAAGAAAAAGCATTTTAATGTGAGACTTTTCTTGAAGGTTATGATTGCAGTTAGTGCCACTCTTGCCTGCCTCTGTGGAGCTCTTGCTGTATACTATCATCCTCTTGGTCAAAGACTAATGCAATTCACTTTCCAAGAGCTGCATGAAGCAACAAATGGATTCAGTAAAATTCTTGGTAAGGGATCTTCACGCAAAGTATACCACGGAACTTTAACAATAGATAACGCAGAACTTGGTATTGCAGTAAAGAAGCTGGAAAAGAAAATTGAGAAAAGCGAAAAAGAATTCATGACTGAGCTCAAAATTATCGGCCGTACGCATCACAAAAATCTGGTGAGACTTTTAGGCTTTTGTAATGAGAATAACCATAGACTTCTTGTCTATGAGTTCATGCCAAATGGAGCATTGTCAAGTTTATTGTTTGCACAAGGAGAAAGACCTTCATGGAGTCAAAGAGTTGATATGGCACTTGGAATCGCAAGAGGCTTACTATACTTGCACAAAGAGTGTGAAAACCAGATCATACATTGTGACATCAAACCACAAAATGTGTTACTTGATGCCAATCACATAGCAAAGATTTCAGATTTTGGACTCTCAAAGCTGTTGAATAAGGATCAAACTAAAACAAGCACAAACTTCAGAGGGACAATAGGGTATATAGCACCTGAATGGCTAAGGAGTGCACCAATAACTTCCAAAGTTGACATATTCAGCTTTGGGGTTATGTTACTAGAGGTTACTTGCTGCAGAAGGCGCATCGAGACGAGTCATGATGATGAGAAAGGAAGTGAAGATGAAGATTTAGTTCTTTCAAATTGGGTATTAAGGTGTATGGTGAGTAGGAATTTAGAGCTATTGGTAGAGCATGACTCTGAAGCACTCAATGATTTGAAGAGCTTTGAAGAAATGGTATTGGTTGGGTTGTGGTGTGTTCATCCAGAGATCAAGCTCTTAGACCTTCAATGA	2361	0.3859	MEVCRKQVEIALSDSEHKLYNHLSTIAPDKIRNILVSFSNKKTYTVLFTSRLGCNFFCFASVLPTNFPLNSQPEITVMVALSSESKDLQLILSLDSIHLPLVGIWFGKIRERTLVWYQSPPVETNSLIQLTSEGHLVVTYSNGSVAHNIDNGDSATSAYMQDNANFVMKDSNLRVVWESFSSPSNTILLGQTLKAGQILYSKGKESSNYSIGNFLLGLQNDGNLVLRAYQISMVISWYVSTITSQDVSLVYNVTSALLYLVSDGSNVYHLTKSTPTPVEDYYHRATIDENGNFQQFTYHKRNGSKWSRVWRAIDDPCRVEAVCGVFGLCTSPDKSTVTAFHVREAITSYIPFDQEDVSKGCHPETVINYCAGPSMMNFKLQVIDDTDLQFYPDFARINDVYLEGCKKTVMDDCNIIAATFNASTSTCAKKRIPLLNARKSSSSKGQKALVKVPNSLESRTLQDSKKKHFNVRLFLKVMIAVSATLACLCGALAVYYHPLGQRLMQFTFQELHEATNGFSKILGKGSSRKVYHGTLTIDNAELGIAVKKLEKKIEKSEKEFMTELKIIGRTHHKNLVRLLGFCNENNHRLLVYEFMPNGALSSLLFAQGERPSWSQRVDMALGIARGLLYLHKECENQIIHCDIKPQNVLLDANHIAKISDFGLSKLLNKDQTKTSTNFRGTIGYIAPEWLRSAPITSKVDIFSFGVMLLEVTCCRRRIETSHDDEKGSEDEDLVLSNWVLRCMVSRNLELLVEHDSEALNDLKSFEEMVLVGLWCVHPEIKLLDLQ	786

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lal23g1622	786	Gene3D	-	66	182	IPR036426	-
	Lal23g1622	786	Gene3D	Transferase(Phosphotransferase) domain 1	595	782	-	-
	Lal23g1622	786	SUPERFAMILY	alpha-D-mannose-specific plant lectins	101	227	IPR036426	-
	Lal23g1622	786	Pfam	S-locus glycoprotein domain	279	335	IPR000858	GO:0048544
	Lal23g1622	786	SUPERFAMILY	Protein kinase-like (PK-like)	500	725	IPR011009	-
	Lal23g1622	786	PIRSF	SRK	92	781	IPR024171	GO:0004674
	Lal23g1622	786	PANTHER	SERINE/THREONINE-PROTEIN KINASE	64	781	-	-
	Lal23g1622	786	Gene3D	-	183	322	-	-
	Lal23g1622	786	Gene3D	Phosphorylase Kinase; domain 1	499	594	-	-
	Lal23g1622	786	Coils	Coil	539	566	-	-
	Lal23g1622	786	SMART	blect_4	66	183	IPR001480	-
	Lal23g1622	786	SMART	serkin_6	516	783	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal23g1622	786	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	638	650	IPR008271	GO:0004672\|GO:0006468
	Lal23g1622	786	Pfam	D-mannose binding lectin	119	194	IPR001480	-
	Lal23g1622	786	ProSiteProfiles	Protein kinase domain profile.	516	780	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lal23g1622	786	ProSiteProfiles	Bulb-type lectin domain profile.	66	181	IPR001480	-
	Lal23g1622	786	PANTHER	G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5	64	781	-	-
	Lal23g1622	786	Pfam	Protein kinase domain	520	741	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lal23g1622	Lal-Chr23	16028260	16032872	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lal23g1622	503	779	Receptor kinase-like Gene Family	AT5G55830	39.223	2.48e-59	212

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_SD-2b	Lal23g1622		Pkinase	2.3e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Lal23g1622	-		-	lang:109330973	1214.13