Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1603 ATGGATAATAATAGCAGCAGCAGCAGCAGTAGTAGGTCTCCTTTTACAGTGTCTCAGTGGCAGGAACTGGAACACCAAGCTTTGATTTACAAGTACATGATGGCTGGTCTTCCTGTTCCACCTGATCTTGTCATTCCCATCCTCAATAGTTTTCACTCCATTTCCATGCCTCAAACCTTCTCCCATCATCCCACTTTGAGTTACTGTTCCTTATATGGGAAGAAGTTGGACCCAGAGCCAGGGAGATGCAGGAGGACTGATGGCAAAAAATGGAGGTGCTCCAAGGAAGCATACCCTGACTCCAAGTACTGTGAGCGACACATGCATCGTGGCCGCAACCGTTCAAGAAAGCCTGTGGAATCTCAAACTATGGCACAATCATCATCTGCTGTGACATCAATGACTGTAACTAGTAGCAACAGTGCAACTGGAAACTTCCAGAACCTTACCACAAATGCCTTTGGTAATAGTACACAAGGTGTTGTTGGTTCTTCCACTAACCAAAGCCACTATCATCTGGATTCCATTCCCTATGGGATCCCAAGTAAAGAATACAGGTATCTCCAAGGACTTAAATCTGAGTGTGGTGAACAAAGTTTGTTTCCCAAAGCTTTAGGAAGCAATAAGTCACACCTAGAAAATACTCTTATGCCAATTGGAGCTTCCTCATTCTCTACATCAAAATCTAATAATAATAATAATAATTCCATGTTGCAAGGTGATTATCTCCAACATTCATTTTTATGTAGTGAATATGCCTCAGGAGGAGAATTTGTGAAGCATGAGAGTCAATCTCTTAGACCTTTCTTTGATGAATGGCCTAAAAACAAGGAAGATGAGGAATCCAACCACAAAGCTTTCTCAACAACTCAGCTATCAATGTCCATTCCTATGTCATCATCCAACTTCTCTACAACTACCTCTCAATCCCCACATACTGGTATTTAG 948 0.4198 MDNNSSSSSSSRSPFTVSQWQELEHQALIYKYMMAGLPVPPDLVIPILNSFHSISMPQTFSHHPTLSYCSLYGKKLDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGRNRSRKPVESQTMAQSSSAVTSMTVTSSNSATGNFQNLTTNAFGNSTQGVVGSSTNQSHYHLDSIPYGIPSKEYRYLQGLKSECGEQSLFPKALGSNKSHLENTLMPIGASSFSTSKSNNNNNNSMLQGDYLQHSFLCSEYASGGEFVKHESQSLRPFFDEWPKNKEDEESNHKAFSTTQLSMSIPMSSSNFSTTTSQSPHTGI 315
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1603 315 SMART QLQ_2 13 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lal23g1603 315 MobiDBLite consensus disorder prediction 296 315 - -
Lal23g1603 315 ProSiteProfiles WRC domain profile. 77 121 IPR014977 -
Lal23g1603 315 Pfam QLQ 14 47 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lal23g1603 315 PANTHER - 11 307 IPR031137 GO:0005634|GO:0006351|GO:0032502
Lal23g1603 315 PANTHER GROWTH-REGULATING FACTOR 5 11 307 - -
Lal23g1603 315 Pfam WRC 78 120 IPR014977 -
Lal23g1603 315 ProSiteProfiles QLQ domain profile. 14 49 IPR014978 GO:0005524|GO:0005634|GO:0006355
Lal23g1603 315 MobiDBLite consensus disorder prediction 109 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1603 Lal-Chr23 15932010 15942323 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1603 5 204 GRF Transcription Factor Family AT3G13960 37.066 1.39e-46 160
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRF Lal23g1603 WRC 1.6e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1603 - - gmx:100797906 395.586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1603 23 15932010 15942323 Lal23g1603 23 15932010 15942323 ECH