Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1590 ATGGCAGGTTTTAGTGATAACCCTTCCGCTCCAAAAATCCTCCTAGCTAAGCCTTCCATCGTAGCCGGCGCTCCCGTCGCCGGTAAATTCGGGCGTGGCGGTGCCGCCGAAGATGACTCCGCACATCTCCGTTCACGCGTTCCTTCCGTCGCCTCCCTCAACCTTCTCTCTGATTCCTGGGATTTCCATATTGACCGCTTTCTCCCTTTTTTGACAGAAAATACAGAGTTTACTGTGATTGGAGTTATTGGGCCACCTGGAGTTGGAAAATCTACTATCATGAATGAACTTTATGGTTTTGATTCAACTTCCCCCGGAATGCTACCACCTTTTTCGGTACTCTCTGAAGAAACTAGGGTCATGGCAAGGCATTGTTCTACAGGCATTGAACCGAGGATTTCTTCTGAACGTATCATTCTTCTTGATACTCAGCCTGTATTTAGCGCTTCTGTTTTATCCGAGATGATGAGACCTGATGGCTCCTCAACAATTTCAGTCATTAATGGAGAATCCATGTCAGCTGAATTGGCTCATGAACTTATGGGTATTCAGCTTGCTGTTCTTCTAGCATCAACATGTCATATTCTGCTGGTGGTATCGGATGGAGTTCACGATGATAGCATGTGGCATTTGATGTTGACGGTCGACCTGTTGAAGCATGGCATACCAGATCCATCATTGTTGGCCTCGTCCCTTTCACAGAGCTCTAGTTCAGGGCTTGAGAAAGATAACAAAGTTCCTGAACGTGAAGAATACATTGCTACTCCTGTTTTTGTACACACCAAGTTGCAAGATCAAGACTTTGCTCCTCAAAATGTTGTGCAGTTGAGAAAGGGACTTATGCAGTATTTCAAACCATCCTCGTTTGTGAGAGAACACGATGGAAACAAGCTTGGAGAGCATGTTTCGTCTTCTATGGTTTATAATAATCCTATGGATTCCAAAATGCTAAATTTGTATGCAATCCCATTGAAGAAAAAAGATGGAAACCCAAGAGCTCAGCATGAGAGTTACATTTCTGCATTATGGAAATTGCGGGATCAGATTTTATCCATGAGGTCGCCATCTTTCGCTAGACCTGTTTCGGAGCGCGAATGGTTGAAGAATTCAGCGAAGATATGGGAACAGAGCAAGATGGTTAGGCTGAAGACATATGCTGGTCTTAGTTTGCTTGCAACTCTGGCTATTACGTATCACGCATTTAACAGTAGAGGCCAATTTTATCCTGCAATGGTGTATCTGTCAACTTCCAAGATCAGTTTGTTGCTTCTTCTTAACATGGGTTTTGTCATTACATGTAGCCTATGGCAATTAACAAAAAAGATATTCTTGGGTTCACTCCGAGAGGCGGAGGTTGAGAGGCTTAATGAACAGTTGTGGAGGGAAGTTATGGAAATCCTCTTTGCAATTACTGTTTTTAGGCAGGACTTCTCTGTTACATTTCTTGCCATGGTTACAGCACTGTTGGCAATTAAGGCTTTGCATTGGTTGGCTCAGAAAAGGGTTGAGTACATTGAGACCACTCCTTCAGTGCCCATGTTGTCCCATATTCGAATTGTATCATTTATGGGCTTCCTTCTTCTTCTAGATAGTCTTCTTTTATACCACTTTATGAAGCACTTGATAGAAACGTGGCAGCCTTCAGTTTCAATATTCTTTTCTTTTGAGTACATGATACTTGCAACAACGACAGTGTCAGTTTTTATGAAGTATATTTTCTATGTCAGTGACATGCTTATGGAGGGACAGTGGGAAAATAAACCAGTCTTCACGTTTTACTTGGAACTCATTAGGGATTTGCTTCATTTGTCTATAAACTATGGTGTTCCGTTGCACTTAATACGGGAGTTGTACGAGACATTTAGGAACTTCAGAGTCCGTGTTGCAGATTACATAAGATATCGTAAGGTCACTTCAAATATGAATGATCGGTTTCCAGATGCAACCCCTGAAGAGCTTAATGCAAGTGATGCAACCTGCATTATCTGTCGTGAGGAGATGACTATTGCCAAGAAACTTATATGTGGACATATTTTTCACGTTCATTGCCTCCGGTCATGGTTGGAGAGGCAGCATACTTGCCCTACCTGCCGAGCCTTGGTTGTTCCTGCAGAAAATGGGACAACTGTGGCTGGAGGGCAGCAAGGATCACAGTCAGATGCTCATCAGCAAGGCACTGGAAGCACTGCTCAAACTGAGGTTGGCAATGTGGTGCCAACTAATAATTTTAGCAGGCAAGCCAGACTCCAAGCTGCTGCTGCAGATGCTGCTTCAATATATGGGAAGTCTTATGTGTACCCCTCTGCAACTTCTTTAGCATGCTCTCCTGGGAACACTCTTTACCCCGGGGTTCAAGCATCTTTGGCTGAACCTACTAATACTAAACTTAAAGGAGAAGGAGCTTCCAGTGAACAAGTGCAAAAGCAGTTTGTTATCCCTGGTAGATCATCAAATGTGTCCTTTTCTCCAATGGGACACTTCCAATTTCTACCTTCACAGTCACCTGTGAATTACGGAGAAGGGTTTGAAAATGATCCGAATATGCCAAGCCCTCTGCTGGAAGCTCAAAGAAAACTTATTCAGTACCAGATTGAGATTCTACAAAATCAGCTTCAGCTTCTGCAGAGGACAAATGTTGAAAAAAGCGTGGATGATGGCGCGTCAGCTGTATCAGATCTTGGTTATCATGATGAGATTGGAGATGGAAAAGCATGA 2715 0.4331 MAGFSDNPSAPKILLAKPSIVAGAPVAGKFGRGGAAEDDSAHLRSRVPSVASLNLLSDSWDFHIDRFLPFLTENTEFTVIGVIGPPGVGKSTIMNELYGFDSTSPGMLPPFSVLSEETRVMARHCSTGIEPRISSERIILLDTQPVFSASVLSEMMRPDGSSTISVINGESMSAELAHELMGIQLAVLLASTCHILLVVSDGVHDDSMWHLMLTVDLLKHGIPDPSLLASSLSQSSSSGLEKDNKVPEREEYIATPVFVHTKLQDQDFAPQNVVQLRKGLMQYFKPSSFVREHDGNKLGEHVSSSMVYNNPMDSKMLNLYAIPLKKKDGNPRAQHESYISALWKLRDQILSMRSPSFARPVSEREWLKNSAKIWEQSKMVRLKTYAGLSLLATLAITYHAFNSRGQFYPAMVYLSTSKISLLLLLNMGFVITCSLWQLTKKIFLGSLREAEVERLNEQLWREVMEILFAITVFRQDFSVTFLAMVTALLAIKALHWLAQKRVEYIETTPSVPMLSHIRIVSFMGFLLLLDSLLLYHFMKHLIETWQPSVSIFFSFEYMILATTTVSVFMKYIFYVSDMLMEGQWENKPVFTFYLELIRDLLHLSINYGVPLHLIRELYETFRNFRVRVADYIRYRKVTSNMNDRFPDATPEELNASDATCIICREEMTIAKKLICGHIFHVHCLRSWLERQHTCPTCRALVVPAENGTTVAGGQQGSQSDAHQQGTGSTAQTEVGNVVPTNNFSRQARLQAAAADAASIYGKSYVYPSATSLACSPGNTLYPGVQASLAEPTNTKLKGEGASSEQVQKQFVIPGRSSNVSFSPMGHFQFLPSQSPVNYGEGFENDPNMPSPLLEAQRKLIQYQIEILQNQLQLLQRTNVEKSVDDGASAVSDLGYHDEIGDGKA 904
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1590 904 PANTHER RING ZINC FINGER PROTEIN 379 812 - -
Lal23g1590 904 PANTHER - 379 812 - -
Lal23g1590 904 Coils Coil 857 884 - -
Lal23g1590 904 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 632 707 IPR013083 -
Lal23g1590 904 SMART ring_2 660 697 IPR001841 -
Lal23g1590 904 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 77 220 IPR027417 -
Lal23g1590 904 SUPERFAMILY RING/U-box 640 704 - -
Lal23g1590 904 CDD RING-H2_synoviolin 657 698 - -
Lal23g1590 904 MobiDBLite consensus disorder prediction 709 734 - -
Lal23g1590 904 Pfam Ring finger domain 659 698 IPR001841 -
Lal23g1590 904 ProSiteProfiles Zinc finger RING-type profile. 660 698 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1590 Lal-Chr23 15834619 15845252 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1590 379 887 C3H Transcription Factor Family AT3G16090 61.798 0.0 613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1590 23 15834619 15845252 Lal23g1590 23 15834619 15845252 ECH