Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1552 ATGGATAAGAAACGTTCCAAAAACAAGGCAAAGATCTCCACTACTACAAGTACCACAAGCGCAACCTCTGAAGAAGTGAACAGTAACGAGTGGGAATTCGTAGATATGAGCGAGCAAGAAGAGGATCTCATTCACAGAATGTATGGCCTAGTTGGAGATAGGTGGGATTTGATAGCGGGTCGTATTCCAGGTCGCAAAGCAGAAGAAATAGAGAGATTCTGGATTATGAGACATGAAGATGTTTTTTCTGTTAAAAGAAATTAA 264 0.4053 MDKKRSKNKAKISTTTSTTSATSEEVNSNEWEFVDMSEQEEDLIHRMYGLVGDRWDLIAGRIPGRKAEEIERFWIMRHEDVFSVKRN 87
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1552 87 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 1 85 - -
Lal23g1552 87 CDD SANT 36 74 IPR001005 -
Lal23g1552 87 PANTHER MYB-LIKE TRANSCRIPTION FACTOR ETC3 1 85 - -
Lal23g1552 87 SUPERFAMILY Homeodomain-like 37 81 IPR009057 -
Lal23g1552 87 MobiDBLite consensus disorder prediction 1 27 - -
Lal23g1552 87 Gene3D - 37 78 - -
Lal23g1552 87 MobiDBLite consensus disorder prediction 11 27 - -
Lal23g1552 87 SMART sant 32 80 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1552 Lal-Chr23 15604372 15607158 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1552 36 74 MYB Transcription Factor Family AT5G52600 58.974 5.17e-12 57.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lal23g1552 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1552 K09422 - gmx:100814431 118.627
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0078 16 480324 482389 Lal23g1552 23 15604372 15607158 LSH