Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1550 ATGGAACAATTCCGGCATATTGGAGAGGTTGTTGGAAGTCTGAAAGCGCTGATGGTGTTGCGTGATGAAATTCAAATCAACCAACGCCAATGTGGTTTGATCCTTGACATATTCAGTTTGGCATTTGAGACATTAGGAGATGAGATAAGGCAGAACCTGAAGCTAGATGAGAGGAATATAAAATGGAAAGCCCTTGAATTTCCATTGAGAGAACTATGCAGGGTTTTCAAAGAAGGTGAGCTTTATATAAGGCATTGCTTAGATTCCAAGGATTGGTGGGGGAAAGCAATGACATTCTCTCAGAACAATGATTGTGTTGAATTCCACATCCACAACTTGCTATGTTACTTCCCTGCGGTCATTGAGGCAATCGAAAATGCAGGTGAGATTTCAGGTCTTGATCAAGATGAGAAGGAGAAGAAGAAACTCATGTTAGCAAGGAAATATGACATGGAATGGAATGATCCTAAACTTTTTCAATGGAGATTTGGTAAGCAGTATTTGGTGCCTCGAGATATATGCAAGCAATTGGAGAATGCTTGGAGGGAAGATAGATGGAGACTCATTGAAGCACTTAAAGAGAAGAGAACTTCTAACAAAAACACTTTGACAAAGAATGAGTTTCACCTTGCGGATATGTTGCTCAAGAAACTTCTTCATGGTTCAGAGAAAATGAACATTCAATTATGTCCAATTTTAGTGCTGCTAGGAGCTAAGGATTATCAAGTGCGGCGAAGATTAGGCCGTGGTCGAGAATTTAAGGAAATCCAATGGCTTGGACAAGGCTTTGCAATGAGACACTTTGTTGGGGAGATGCAAACATATGAAGCTGAGATTTCAACTCTTATGTCACTTTCTCACCCTAACATATTGCAATACTTGTGTGGTTTTTATGATGATGAGAAAAGAGAGTTTTCTTTAGTGATGGAGTTAATGAACAAAGACTTGTGGACCTACATGAAGGAGAATTGTGGTCCAAGGAGACAGATTTTGTTCTCTATACCTGTAGTTGTGGATCTTATGCTTCAAATGGCAAGGGGCATTGAGTACCTCCACTCCAAAAAAATTTACCATGGTGACCTTAACCCTTGTAATATCCTACTCAGACCAAGAAACTACCAAGAAGGTTATTTTCAAGCAAAAGTTTCAGGTTTTGGCCTAACTTGTGTCAAGAGCAATGACACTACTCAAAGATCAACCAGAAGTCCAAATAATGAGGAGTTTAACCCTTCTAGTTGGTATGCTCCAGAAATTCTAACTGAGCTAGAACAAACAAGAAATGCTTCAACATATTCCAAGTACTCGGAGAAAGCTGATGCATACAGCTTTGGAATGATATGCTTTGAGCTTTTAACAGGTAAAGTGCCTTTTGAAGATAACCATCTTCAAGGGGATAGAACAAACCAAAAAATCAAAGCAGGGGAAAGGCCTTTGTTCCCATACCGTTCACCAAAATACCTTGTGAATTTGATCAAAAAATGTTGGCAAACTGACCCTTCTCAACGTCCAACTTTCTCATCTATATGTAGAATTTTGCGTTACATCAAAAAATTACTTTCAATGAACACAGAATTCCATGTTATCAATCCTGAACTTAATCAACTTGAGTTGCTGTCCCCACCTGTGGATTGTTGTGACATAGAAGCAATGTTCCTTAAGAACTTCCCAATTGATAGGCCATCTATTTTGTCATCAATATCACAAATACCATATGAAATGTTTGCTTATAAAGTTGTGGAGAAAGGGAAGATTATAAGTAATAGCAGCAATGCTAAAGATAACAAGTACATTGAGCCATCTAAGGATGAGGCCACATTGTCTAAGGAAGAAAATGATGAACAAAACACAGTTTGTGGAGATGATAATGCATCCATAGCAGAAGAGCTGCTCCATGATCCACTCCCACAGATAACCATTCCAAAGCTAAACTGTGAAGACACAAAATCTCTTTGCTTTGAAGCCCCGTCCAAGAAAAGTTTCAAAGTAAAGAAACCAACACTAGACAAGTCCAAAAAAGACAAAGGGATACCAAAATTGCAAACAACAAGATCATTGCCACCATCTTTAACTGGTCGAGGTTTAAGGGTGAGTTCCTCAGTGTCATCCAGCCCTCTGAGCCCGGGTAGAAGAAGACCCTCCAATGTCTCAGAATCTTCAAAGATCAACAAACCATCAGTGTCCACTCCATCCAGTTCCATTAGGAGAAAAACATCACCTGAGGCCCAAGCATTAGATTCAAAGCCCAGCTTAAAGCTGAAAAGGGACCAGTCACCATTGTCCAAACATGACAATATCCCAGATTCTAATGGTTCAACTTTGAAGATGAAAAATTCACAACTTACACCAAGCCCTTCTATGAGCTCAGCAAGATTCGGACGTGCAAGTACTGCCCCCAATATGAAGGTGCAAAAAGGTTTCATGTATAGTACATTCACAAGCAGAAAAAATAGTCATTTATCAGATTTGGATAAGACAAGAGGTAGACTATCACCACTGGCATTGAGTCCTTTAAGCCCATATGTGACAAGAGGAAGAAAATATGGTCACCTTTCTGACTATATCACTAGTTCTAAGACCAAAAGACAAAGCCTTTCACCATTAGCATTGAGCCCTTTGAGCTCATATGCTCCAAGAAGAAGAACAAGTGGCCATGTCTCGGATTAA 2664 0.3953 MEQFRHIGEVVGSLKALMVLRDEIQINQRQCGLILDIFSLAFETLGDEIRQNLKLDERNIKWKALEFPLRELCRVFKEGELYIRHCLDSKDWWGKAMTFSQNNDCVEFHIHNLLCYFPAVIEAIENAGEISGLDQDEKEKKKLMLARKYDMEWNDPKLFQWRFGKQYLVPRDICKQLENAWREDRWRLIEALKEKRTSNKNTLTKNEFHLADMLLKKLLHGSEKMNIQLCPILVLLGAKDYQVRRRLGRGREFKEIQWLGQGFAMRHFVGEMQTYEAEISTLMSLSHPNILQYLCGFYDDEKREFSLVMELMNKDLWTYMKENCGPRRQILFSIPVVVDLMLQMARGIEYLHSKKIYHGDLNPCNILLRPRNYQEGYFQAKVSGFGLTCVKSNDTTQRSTRSPNNEEFNPSSWYAPEILTELEQTRNASTYSKYSEKADAYSFGMICFELLTGKVPFEDNHLQGDRTNQKIKAGERPLFPYRSPKYLVNLIKKCWQTDPSQRPTFSSICRILRYIKKLLSMNTEFHVINPELNQLELLSPPVDCCDIEAMFLKNFPIDRPSILSSISQIPYEMFAYKVVEKGKIISNSSNAKDNKYIEPSKDEATLSKEENDEQNTVCGDDNASIAEELLHDPLPQITIPKLNCEDTKSLCFEAPSKKSFKVKKPTLDKSKKDKGIPKLQTTRSLPPSLTGRGLRVSSSVSSSPLSPGRRRPSNVSESSKINKPSVSTPSSSIRRKTSPEAQALDSKPSLKLKRDQSPLSKHDNIPDSNGSTLKMKNSQLTPSPSMSSARFGRASTAPNMKVQKGFMYSTFTSRKNSHLSDLDKTRGRLSPLALSPLSPYVTRGRKYGHLSDYITSSKTKRQSLSPLALSPLSSYAPRRRTSGHVSD 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1550 887 MobiDBLite consensus disorder prediction 762 794 - -
Lal23g1550 887 Pfam Protein of unknown function (DUF1221) 21 237 IPR010632 -
Lal23g1550 887 MobiDBLite consensus disorder prediction 595 615 - -
Lal23g1550 887 MobiDBLite consensus disorder prediction 747 761 - -
Lal23g1550 887 MobiDBLite consensus disorder prediction 681 744 - -
Lal23g1550 887 PANTHER SERINE-THREONINE PROTEIN KINASE 1 733 - -
Lal23g1550 887 Gene3D Transferase(Phosphotransferase) domain 1 239 535 - -
Lal23g1550 887 MobiDBLite consensus disorder prediction 590 616 - -
Lal23g1550 887 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 733 - -
Lal23g1550 887 MobiDBLite consensus disorder prediction 663 799 - -
Lal23g1550 887 MobiDBLite consensus disorder prediction 853 887 - -
Lal23g1550 887 SUPERFAMILY Protein kinase-like (PK-like) 239 522 IPR011009 -
Lal23g1550 887 Pfam Protein tyrosine and serine/threonine kinase 272 511 IPR001245 GO:0004672|GO:0006468
Lal23g1550 887 ProSiteProfiles Protein kinase domain profile. 241 515 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g1550 887 MobiDBLite consensus disorder prediction 663 678 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1550 Lal-Chr23 15594624 15598435 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1550 273 512 MAP Kinase Kinase Kinase AT1G62400 31.429 1.72e-26 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Lal23g1550 PK_Tyr_Ser-Thr 4.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1550 - - cam:101509043 1155.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1550 23 15594624 15598435 Lal23g1550 23 15594624 15598435 ECH
Lal16g0081 16 486881 489953 Lal23g1550 23 15594624 15598435 LSH