Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1537 ATGGAGGAAGGGGAATTAGGGTTTTGTGCAGCAAAGGGAGTGGTCGAAGAGCTTTCTATCTTTGCAATCATGATAATTTCCGAGAAGAACCGTAAGGAGATCTCCAAATACCTCTTTCAAGAGGGAGTTTGCTATGCGAAGAAGGACTTTAATCTAGCAAAGCACCCAGAGATAGATGTGCCAAATCTACAGGTGATTAAGCTGATGCAGAGTTTCAAGTCAAGGGAGTATGTGAGGGAGACATTTGCTTGGATGCACTATTACTGGTTCCTCACTAATGATGGCATTGAGTTCCTTAGGACTTACCTCAATCTCCCTTCAGAGATTGTCCCAGCCACTCTTAAGAAGCAGGCTAAGCCAGCTGGCAGACCCTTTGGCGGCCCACCCGGTGATCGCCCAAGAGGTCCACCACGCTTTGAAGGGGAAAGGAGATTTGGGGGTGACCGTGATGGATACCGTGGAGGTCCCCGAGGACCTGGTGGTGACTTTGGAGGTGAAAAGGGTGGAGCTCCTGCTGACTACAGACCTTCCTTTGGGGGTCCTGGTGGAAGGTCTGGTTTTGGTCGTGGTGCAGGTGGTTATGGAGCACCCCCTAGCTCAAATGTTTAA 609 0.4992 MEEGELGFCAAKGVVEELSIFAIMIISEKNRKEISKYLFQEGVCYAKKDFNLAKHPEIDVPNLQVIKLMQSFKSREYVRETFAWMHYYWFLTNDGIEFLRTYLNLPSEIVPATLKKQAKPAGRPFGGPPGDRPRGPPRFEGERRFGGDRDGYRGGPRGPGGDFGGEKGGAPADYRPSFGGPGGRSGFGRGAGGYGAPPSSNV 202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1537 202 MobiDBLite consensus disorder prediction 116 202 - -
Lal23g1537 202 PANTHER 40S RIBOSOMAL PROTEIN S10-1-LIKE 14 201 - -
Lal23g1537 202 Pfam Plectin/S10 domain 26 117 IPR005326 -
Lal23g1537 202 PANTHER 40S RIBOSOMAL PROTEIN S10 14 201 IPR037447 -
Lal23g1537 202 MobiDBLite consensus disorder prediction 135 151 - -
Lal23g1537 202 Gene3D - 24 127 IPR036388 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1537 Lal-Chr23 15508506 15512886 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1537 24 178 Cytoplasmic Ribosomal Protein Gene Family AT5G52650 82.581 2.88e-74 220
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1537 K02947 - gmx:100500445 216.468
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1537 23 15508506 15512886 Lal23g1537 23 15508506 15512886 ECH
Lal16g0088 16 524423 526725 Lal23g1537 23 15508506 15512886 LSH
Lal15g0065 15 450136 451881 Lal23g1537 23 15508506 15512886 LSH
Lal23g1537 23 15508506 15512886 Lal16g1195 16 8232471 8234145 PCT