Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1534 ATGGCTAGACAAGTGTGTGAAGAGAAAACAAGGGAAATGGTGTCATCATCTTCAGCTGGATTCTCATACTCTGATCATGTGCCACCAACCCATCATCTAGTGAACCAGATCCAAGGCTTTGTCTCTGACCCAGACATGTTCAACCTCACCTCAAACATGGAGATGATAGGGTTTCACAAGAATCAGCTTCATCATCAGCAGCAACAAGAACAGTGTGACCGCACCATGTGGAATAAAAGTAATAATTTCTTCTCAAAACATGGACCATCTACTTCCACCAAAACCATGAATGAGTCGTCGGCCACTTTCTATGAATATAATAATAATAATAATCATAAACCAGATTTTACAACTGGGATTTCTGAAACAACAACCAATGAGAATCTAATTATTGGAACTACTACTCATGAAGATTCAGCTCTATGGCAAGAGAATAGGTTAATGGTTGATGATTCTTCTTTAAGGTGTGTGTTCCCTTGTGAAGGGAATGAAAGGCCAAGTCAAGGTCTCTCACTCTCTCTTAGTTCAACCAACCCTTCAAGTATTGGCTTACAATCTTTTGAGCTAAGACAAACTACCCAACATCATCATCAGCCACAACCTGACTTGGGGTTCTTTGGAAAATCACATAATGTTCAACAGCACCAACAACAGCAGATTTTGCAAGATGCGTACTTGAGTGCTAAAGCTGCAAGTGTTTATGAAGGTCATTTTTTCATCAAGAACTCAAAGTACTTGGTACCGGCACAGGAGCTTCTAAACGAGTTTTGTAGTTTGGGAACAAAGCAAAATGAGATGGAAATAAAGCAAAAGTTCAACAAGAACAAGCAGTGGGAAGATGATAGCAACACCGGTATTGGTTCCTCAAAGAAGCCTACTCTTACCTCTTTGGAGTTTGTAGAGTTGCAGAAGAGAAAGACAAAGCTTCTGTCGATGCTTGAAGAGGTTGATAGAAGATACAAGCACTACCGTAATCAGATGAAGTCAGTGGTATCCTCTTTTGAAGCAGTAGCAGGGAATGGGGCGGCCACAGTGTATTCAGCTTTGGCTTTGAAAGCCATGTCTAGACATTTCAGGTGTTTGAAGGATGGGATTTTGGGGCAGATAGAAGCCACAAAGAAAAGCATGGGAGAGAAGGATCCAATAGCACCAGGCACAACAAGGGGTGAAACACCAAGGCTCAAAGTTATTGACCAAGCACTAAGACAACAAAGGGCCTTTCAGCAAATGACTATGATGGAAACACATCCATGGAGACCCCAACGTGGTCTTCCTGAACGATCTGTTTCTGTTCTTAGGGCTTGGCTTTTTGAGCATTTTCTCCATCCGTACCCAAGTGATGTTGATAAACATATTTTAGCACGTCAAACTGGCCTCTCTAGAAGTCAGGTATCAAATTGGTTCATTAATGCAAGGGTGAGGCTATGGAAGCCAATGGTGGAGGAAATGTACTTAGAAGAAGTGAAGGAGCATGAAAACAATATGCTTAATTCCTCAGAGGGTGGTACTGATGATCATGATCCCGAAGATAATATTAATCCCAATAATGTTGAAAACCAATTACCTTCATCATTGTTCGAGGATCATAAACCAATTCTTCAAATCGACTCAAGGTGTGCTTCTTCCATCATCAATAACCATAACACAGATAATAACAGAAACAATTCAACAAAGAACAACACTAAAACCCTTCACGACAACCACACTATGAATCCTCATGACCATGTCAGAATAATTGGGCCTAATTCCACCACCGACACATTCGGGTCAATGGAACTTGATTTTTCATCTTACAACAACCACCATTCGTCTGGTATGGTTCCTTACACAACAAGTAACGAACAGAATGCAAACCACGGTTTCAATGGTGGCATTAGGGCTAGTGTTGTGTCTTTGACACTAGGGTTACAACAGCATGGTGAAAGTGGTGTTAGCCTAGGATTCCCTTCAGTAACACATGAGAGTTCAATGCTATACACAAGGGACCAGATTGAAGATTGTCAAACAATTCAGTACTCACTTCTTGATGGTGAAGGACAAAATCTTCAATACAGGAATTTGATGGGAGCACAATTGCTACATGACTTGGCAGGATAG 2097 0.4111 MARQVCEEKTREMVSSSSAGFSYSDHVPPTHHLVNQIQGFVSDPDMFNLTSNMEMIGFHKNQLHHQQQQEQCDRTMWNKSNNFFSKHGPSTSTKTMNESSATFYEYNNNNNHKPDFTTGISETTTNENLIIGTTTHEDSALWQENRLMVDDSSLRCVFPCEGNERPSQGLSLSLSSTNPSSIGLQSFELRQTTQHHHQPQPDLGFFGKSHNVQQHQQQQILQDAYLSAKAASVYEGHFFIKNSKYLVPAQELLNEFCSLGTKQNEMEIKQKFNKNKQWEDDSNTGIGSSKKPTLTSLEFVELQKRKTKLLSMLEEVDRRYKHYRNQMKSVVSSFEAVAGNGAATVYSALALKAMSRHFRCLKDGILGQIEATKKSMGEKDPIAPGTTRGETPRLKVIDQALRQQRAFQQMTMMETHPWRPQRGLPERSVSVLRAWLFEHFLHPYPSDVDKHILARQTGLSRSQVSNWFINARVRLWKPMVEEMYLEEVKEHENNMLNSSEGGTDDHDPEDNINPNNVENQLPSSLFEDHKPILQIDSRCASSIINNHNTDNNRNNSTKNNTKTLHDNHTMNPHDHVRIIGPNSTTDTFGSMELDFSSYNNHHSSGMVPYTTSNEQNANHGFNGGIRASVVSLTLGLQQHGESGVSLGFPSVTHESSMLYTRDQIEDCQTIQYSLLDGEGQNLQYRNLMGAQLLHDLAG 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1534 698 SUPERFAMILY Homeodomain-like 419 484 IPR009057 -
Lal23g1534 698 PANTHER HOMEOBOX PROTEIN TRANSCRIPTION FACTORS 1 653 - -
Lal23g1534 698 MobiDBLite consensus disorder prediction 1 21 - -
Lal23g1534 698 MobiDBLite consensus disorder prediction 495 517 - -
Lal23g1534 698 Pfam Associated with HOX 240 365 IPR006563 -
Lal23g1534 698 Gene3D - 421 483 - -
Lal23g1534 698 PANTHER HOMEOBOX PROTEIN BEL1 HOMOLOG 1 653 - -
Lal23g1534 698 ProSiteProfiles 'Homeobox' domain profile. 415 478 IPR001356 GO:0003677
Lal23g1534 698 Pfam Homeobox KN domain 435 474 IPR008422 GO:0003677|GO:0006355
Lal23g1534 698 SMART prehox3 234 367 IPR006563 -
Lal23g1534 698 SMART HOX_1 418 482 IPR001356 GO:0003677
Lal23g1534 698 CDD homeodomain 418 479 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1534 Lal-Chr23 15485835 15492121 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1534 144 697 Homeobox Transcription Factor Family AT5G41410 45.333 2.26e-134 407
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-BELL Lal23g1534 POX 3.9e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1534 - - lang:109331282 1261.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1534 23 15485835 15492121 Lal23g1534 23 15485835 15492121 ECH
Lal16g0091 16 531005 536325 Lal23g1534 23 15485835 15492121 LSH
Lal23g1534 23 15485835 15492121 Lal16g1200 16 8261263 8264443 PCT
Lal23g1534 23 15485835 15492121 Lal15g1411 15 16254899 16259853 PCT
Lal7g0913 7 15606311 15609669 Lal23g1534 23 15485835 15492121 PCT