Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1532 ATGGGATTCCCAACAGGATATCCAGACATTCTAATTCCAAAGCCATTTGTTCACATCCTTACCTTATTAGCTTTCATTAGAAACCAAATCCTTATCTTCTTCCGCTACCTCGGCTTCCACGAATTCCTCCAACAAGACATTGTCTGGCCTGACCCGCCACCTGAATTTCAATCCATCTCCGCCCTCCTCATCCAGGAAATCCTGCCGGTGGTCAAGTTCTCTGACATGGAAGAGCCTGCGGCGGAGACCTGCGCCGTCTGTCTCTACAAATTTGAGGCAGATGAGGAGATCAGGAGGTTAACGAATTGCTGTCACATATTCCATAAGGGGTGTCTGGACCGTTGGATGGGGTATGATCAGAGAACATGCCCTATGTGTAGGACACCCTTCATACCTTACGATATGCAAAGCACCTTTAATGAGAGGCTCTGGCTTGCTTCTGGGATACCTGAATTCCACTCTCAATATCCTCACATCACTTCTTTCTAG 489 0.4744 MGFPTGYPDILIPKPFVHILTLLAFIRNQILIFFRYLGFHEFLQQDIVWPDPPPEFQSISALLIQEILPVVKFSDMEEPAAETCAVCLYKFEADEEIRRLTNCCHIFHKGCLDRWMGYDQRTCPMCRTPFIPYDMQSTFNERLWLASGIPEFHSQYPHITSF 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1532 162 SUPERFAMILY RING/U-box 68 133 - -
Lal23g1532 162 PANTHER RING ZINC FINGER PROTEIN-RELATED 1 156 - -
Lal23g1532 162 SMART ring_2 84 126 IPR001841 -
Lal23g1532 162 Pfam Ring finger domain 83 127 IPR001841 -
Lal23g1532 162 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 63 133 IPR013083 -
Lal23g1532 162 CDD RING-H2 84 127 - -
Lal23g1532 162 ProSiteProfiles Zinc finger RING-type profile. 84 127 IPR001841 -
Lal23g1532 162 PANTHER BRH1 RING FINGER PROTEIN 1 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1532 Lal-Chr23 15467206 15467694 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1532 1 148 C3H Transcription Factor Family AT1G63840 55.195 2.91e-57 175
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1532 K16281 - jre:109014495 239.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1532 23 15467206 15467694 Lal23g1532 23 15467206 15467694 ECH
Lal15g0066 15 457075 457569 Lal23g1532 23 15467206 15467694 LSH
Lal23g1532 23 15467206 15467694 Lal15g1408 15 16218695 16219126 PCT