Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1531 ATGCCATCGTGGTTGGGAAAGTTCACATCAAAAAAGGCGAAGAAGGAAAGGAAAGTCAATATCTTTGATATGTTTCAACGTAAATTACAAAGCTCTTCCGAAGATAAATGCAATGATAAATCAAGAGGGTCTAAGAGATATGATGCTGACACTATCTCAAAGAAGGAATATCAACTCCCCGTGCCTTCAAGATCAGTATCACTATCACCCTCTAGACTTATTCTCTGCTGTAAACGTTTTGCTGAAAACCCTAATGCAACATCAGCAGTGGGAGGTAATAGAGGCTCAAAACCTCTTCATGTTTCAAATAGTGAAGAACCTACAGGTGGTGATGGAGATATAGACAATGCATCTCTTTTTAGTGATGACAACTATAGTGATATTATTATCGAAGATCCACTTGCATTGATGGTTGATCCACTTAATCCCTTAGCACCTGATTTTGAAAATGGAAACAAAGCCACCATGAACAGTTCCTTGAGTGTGGCGCGCAATGATCTCTTACCTGAGCTATCCATAAGGGGCGTAGGGCATCTGAAAAATCTACAAATACCTAATCATGGTGGGTTTGGCACTCCAGCTGATAGTTCAATGCCAAGTTCTTCTAAACTCAATTCTAGCAGTTTCCTATTTCCTACAACCAATATTTCCGTGGAAACTTCTTCTCCCAGCAGTCCTGATTCAGAAGTTCTAATAGACCCTTTAAATTTTAAAAAAGGGAAGTTTCTTGGACGAGGATCATTTGGACAAGTGTTTGTTGGTTTTAACAGTGATAGCGGTCTGATGTGTGCAATGAAGGAGGTAACCCTTTATTCAGATGATGAGAAATCAACGGAAAGTGCAAAACAACTTCGCCGAGAAGTAGCACTGCTTAGTCGCTTGCGGCATCCAAACATAATTCGCTATTATGGATCTGAGACGATAGATGACAAACTTTATATATTTTTGGAATATGCTGCTGGTGGGTCATTACATAAGTTGCTTCAAGAATATGATGAACTTGGTGAAGATGCCATCCGTTGTTATACTGCACAAATTTTGGCAGGTCTTTCTTACTTACATGGTAAAGGCATAGTCCATAGGGACATTAAAGGAGCAAACATATTGATGGACCCGAATGGGACCGTGAAACTAGCAGATTTTGGAACAGCAAAGCATATAAAGGGAAAGTCTTGTCCATTCTCTTTAAAAGGTAGTCCTCACTGGATGGCACCAGAGATTATTCAAAATCCAAGTGATTGCAACCTTTCAGTTGATATATGGAGTCTTGGTTGTACCATTTTGGAAATGGCTACAACGAAACCACCGTGGAGTAAATTTGAAGGGGTTGCTGTTATGTACAAACTCGGGAACACTGATGAAGTGCCTATAATCCCCAGCTACCTATCAAAAGAAGGAAGGGACTTTCTCCGCCTTTGTCTACAAAGGGAACCGAAGTGCCGTCCCTCAGCTTCTGAGCTTTTGCTGCATCCTTTTGTTAAGGATATTGTACTCGAAAAACATATCCTGGAAGAACTTGATGCAAGCTTAGGTTTAAAAGAAACTGATACCTCTCAACCAAGAAGCTTCAGAATTAGTCCAGTTTCAAGTGAAATGCAATCACCGCGAAGACATAAGTCATGTCCTGTGTCTCCTAGAAAGAGCACAGAGTTACCTATTTCATCAATGCATCTGAATAGAAGGACGTATTCTTCTCGGATGTGGAGTCCTGATATTGCATCTATGACATCGTTTTGCCAAACCAAACATGCAATACATAGTCCTCACATGGCATCAGGCTCTTCTTCACCATCACAACGTACTAGTGGTGCTGGTGCAATTGCATTTACTCGACCAAACCAGCAAATACTCATTCCTCATATTGCATCTGGCTCTTCTTCATCGCTCACCTTTGGTACTACTGGTGCAATTCCATTGACTCAAATAAACCAGCCAACATTCTCACGTGAATCTTTGGGTATGAGCCAAAGGTCTGAAAATGTGAGTAGAAGGTTTGCTACTTCCTCAATATATTGTCCTAGTAACGCACCTGCAGGCTCTTCTTCCCAGTCACCGCGCACTGGTGATGATGCTTTTGGGTGTGATTCAAAGGACCCAAAATAG 2103 0.4113 MPSWLGKFTSKKAKKERKVNIFDMFQRKLQSSSEDKCNDKSRGSKRYDADTISKKEYQLPVPSRSVSLSPSRLILCCKRFAENPNATSAVGGNRGSKPLHVSNSEEPTGGDGDIDNASLFSDDNYSDIIIEDPLALMVDPLNPLAPDFENGNKATMNSSLSVARNDLLPELSIRGVGHLKNLQIPNHGGFGTPADSSMPSSSKLNSSSFLFPTTNISVETSSPSSPDSEVLIDPLNFKKGKFLGRGSFGQVFVGFNSDSGLMCAMKEVTLYSDDEKSTESAKQLRREVALLSRLRHPNIIRYYGSETIDDKLYIFLEYAAGGSLHKLLQEYDELGEDAIRCYTAQILAGLSYLHGKGIVHRDIKGANILMDPNGTVKLADFGTAKHIKGKSCPFSLKGSPHWMAPEIIQNPSDCNLSVDIWSLGCTILEMATTKPPWSKFEGVAVMYKLGNTDEVPIIPSYLSKEGRDFLRLCLQREPKCRPSASELLLHPFVKDIVLEKHILEELDASLGLKETDTSQPRSFRISPVSSEMQSPRRHKSCPVSPRKSTELPISSMHLNRRTYSSRMWSPDIASMTSFCQTKHAIHSPHMASGSSSPSQRTSGAGAIAFTRPNQQILIPHIASGSSSSLTFGTTGAIPLTQINQPTFSRESLGMSQRSENVSRRFATSSIYCPSNAPAGSSSQSPRTGDDAFGCDSKDPK 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1531 700 MobiDBLite consensus disorder prediction 86 103 - -
Lal23g1531 700 MobiDBLite consensus disorder prediction 670 689 - -
Lal23g1531 700 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 1 87 - -
Lal23g1531 700 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE YODA 221 613 - -
Lal23g1531 700 Pfam Protein kinase domain 237 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g1531 700 SUPERFAMILY Protein kinase-like (PK-like) 236 565 IPR011009 -
Lal23g1531 700 SMART serkin_6 237 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g1531 700 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 221 613 - -
Lal23g1531 700 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 1 87 - -
Lal23g1531 700 MobiDBLite consensus disorder prediction 30 49 - -
Lal23g1531 700 MobiDBLite consensus disorder prediction 670 700 - -
Lal23g1531 700 ProSitePatterns Protein kinases ATP-binding region signature. 243 266 IPR017441 GO:0005524
Lal23g1531 700 MobiDBLite consensus disorder prediction 86 117 - -
Lal23g1531 700 Gene3D Transferase(Phosphotransferase) domain 1 235 526 - -
Lal23g1531 700 MobiDBLite consensus disorder prediction 517 537 - -
Lal23g1531 700 ProSiteProfiles Protein kinase domain profile. 237 493 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g1531 700 ProSitePatterns Serine/Threonine protein kinases active-site signature. 358 370 IPR008271 GO:0004672|GO:0006468
Lal23g1531 700 MobiDBLite consensus disorder prediction 517 549 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1531 Lal-Chr23 15455511 15459564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1531 212 617 MAP Kinase Kinase Kinase AT1G63700 51.716 2.10e-132 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Lal23g1531 Pkinase 3.6e-68 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1531 K20717 - gmx:100814422 446.047
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1531 23 15455511 15459564 Lal23g1531 23 15455511 15459564 ECH