Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1507 ATGCAGAATCCAAAGCACCCTTCAGGGGATTCCTCCACTACTGATGGCAAATCCCCACCCTCTTCCCCTGAACACCCTCCTCCTCCTCCTCCTTCCGATGATGACACTAACACAAACATAGGGGATTTAAGTTTAACCATCCAGAATACTAATAATAATTCTGGAGGAAGAGATGGAAAAGAAACAAAGATCATGAAAACTGCACTGGAAGTGTTGGCAGAACTTGCCAGTGATGAAAGCAATAATGATGTTGGTGGTGATGGTGGTGGAATGGGACAAAGTGGTGGCAGTGTTGCATCTGTGGCTGTGGCAGTGGGTAGTGCTGGTGGTTCAGTGGCGGTGGTGCAAGGGGGTGGTGGTAGATATCAGGGACGTGCTGCTGGGAAGAGGAGAAAAGTTTCGCATGTAAAAGATCCTCCACGGGGAAAACCTACTTGCCCATCGTGCAACAAAGAGTTTAGGAGTTGGAAGGGCGCGTTTGGCCACCAGCGCAAACACCCTGAACGTAACTATCGTGGTTTCAATGAGCCTCCTTCTTTCACTACACCATCATCCCTTCGCGCTGGAGAAGGTGAGGGTGCGAGGACTGCAGGGGATAGGGCTGCAGCACCACAACCACCACCTGCTGGAGGGCTTCCATTTGATCTGAACCAGCCAGTTTCTGATGTATCAGGGTCCTCAAATGTTGCAGATCAGGGAAATGAAGAAGCACAAGTGTCTCCTCCTGCTGCTGAAGAAAAGAATTTAGGGTTTGACTTGAATGCGTTGCCCACTGATGAAGATGATAATGAAGACAATTAA 801 0.4906 MQNPKHPSGDSSTTDGKSPPSSPEHPPPPPPSDDDTNTNIGDLSLTIQNTNNNSGGRDGKETKIMKTALEVLAELASDESNNDVGGDGGGMGQSGGSVASVAVAVGSAGGSVAVVQGGGGRYQGRAAGKRRKVSHVKDPPRGKPTCPSCNKEFRSWKGAFGHQRKHPERNYRGFNEPPSFTTPSSLRAGEGEGARTAGDRAAAPQPPPAGGLPFDLNQPVSDVSGSSNVADQGNEEAQVSPPAAEEKNLGFDLNALPTDEDDNEDN 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1507 266 ProSitePatterns Zinc finger C2H2 type domain signature. 146 166 IPR013087 -
Lal23g1507 266 MobiDBLite consensus disorder prediction 35 58 - -
Lal23g1507 266 MobiDBLite consensus disorder prediction 1 19 - -
Lal23g1507 266 MobiDBLite consensus disorder prediction 219 235 - -
Lal23g1507 266 PANTHER TRANSCRIPTION REGULATORY PROTEIN SNF2-LIKE 63 266 - -
Lal23g1507 266 MobiDBLite consensus disorder prediction 75 95 - -
Lal23g1507 266 MobiDBLite consensus disorder prediction 1 63 - -
Lal23g1507 266 MobiDBLite consensus disorder prediction 115 266 - -
Lal23g1507 266 MobiDBLite consensus disorder prediction 20 34 - -
Lal23g1507 266 MobiDBLite consensus disorder prediction 157 172 - -
Lal23g1507 266 PANTHER ZINC FINGER PROTEIN ZAT2-RELATED 63 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1507 Lal-Chr23 15285892 15287403 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1507 146 185 C2H2 Transcription Factor Family AT4G35280 50.000 9.41e-10 56.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lal23g1507 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1507 - - lang:109350387 207.223