Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1504 ATGGTTATTTCTAATGACAAAACTTCTAACTCAATCAACTCCACAACCTTACAAGATCAAATGGGCACCCGAAAGTTTGAGCAGAATAACAGAAAAGCCTTAGCTATCATTAATCAGAATATGGCAGTGGAAGGTCGATATCCATGTATTGTTAACAAGAGGGCTTTCTCAGAAAAACATGGGGTTTATGAGAAGAAGCAAGCAGATCCAGTTCATAGACCAATCACCAGGAGGTTGGCTGCACAAATTGCTAGTACAAAGCAAACTCGCGCTGAGGGAAACAAGAAGTCAAACTTGGGAATTTCAAATTGGAATGACTTTGGACAGTACATTTTTATTGATGATGAACCATCAAAGTCAATGGAAGACCAGCCAGTGCCGATGTCTTTAGAGCAAACAGAAGCAATGCTAAGTGAACCAGATCATATGGAGGAAGTTGAGATGGAAGATATAGATGAAGAGTCTCTTTTGGACATTGATAACAGTGATGCAAATAACCCTCTTGCAGTTGTGGACTATATTAAAGATCTTTATGCACACTACACAAAAATTGAGAGTGCTAGCTGTGTCTCACCGAATTATATGGCAGAACAATTCGACATAAACGAAAGGATGAGAGCCGTACTGATTGACTGGCTTATTGAGGTTCACGACAAATTTGACCTCCTGCATGAGACATTGTTTCTCACAGTTAATCTCATAGATAGATTTTTGGAAAAACAGACAGTGGCAAGAAAGAAGCTTCAGTTGGTTGGATTGGTTGCCATGTTGTTGGCATGCAAGTATGAAGAAGTTTCTGTTCCTGTGGTCGAAGATCTTATCCTTATATCAGACAAAGCATACTCAAGGAAGGAAGTTCTGGAGATGGAGAAGTTGATGGTCAACACATTGCAGTTTAACATGTCTGTGCCAACATCATATGTTTTTATAAAAAGGTTCCTAAAGGCAGCTCAAGCAGACAAAAAACTTGAGCTATTAGCTTTCTTCTTGGTAGAGCTATCTCTAGTGGAGTATGAGATGTTGAAATTCCCACCATCTATGCTAGCTGCAGCTGGAGTCTATACAGCTCAATGCACTATCTATGGTTTCAAACAGTGGAATAAGACTTGTGAATGGCATGCCAACTACTCAGAAGATCAACTATTAGAGTGCTCTAGTTTAATGGTTGATTTCCACAAGAATGCTGGGAGAGGGAAACTTACAGGGGTATATAGGAAATACTACTCATCTAAGTTTAGCTACACTGCAAAATATGAACCAGCAAGTTTTCTTTTGGAGAACAACCCATTGTAG 1293 0.3944 MVISNDKTSNSINSTTLQDQMGTRKFEQNNRKALAIINQNMAVEGRYPCIVNKRAFSEKHGVYEKKQADPVHRPITRRLAAQIASTKQTRAEGNKKSNLGISNWNDFGQYIFIDDEPSKSMEDQPVPMSLEQTEAMLSEPDHMEEVEMEDIDEESLLDIDNSDANNPLAVVDYIKDLYAHYTKIESASCVSPNYMAEQFDINERMRAVLIDWLIEVHDKFDLLHETLFLTVNLIDRFLEKQTVARKKLQLVGLVAMLLACKYEEVSVPVVEDLILISDKAYSRKEVLEMEKLMVNTLQFNMSVPTSYVFIKRFLKAAQADKKLELLAFFLVELSLVEYEMLKFPPSMLAAAGVYTAQCTIYGFKQWNKTCEWHANYSEDQLLECSSLMVDFHKNAGRGKLTGVYRKYYSSKFSYTAKYEPASFLLENNPL 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1504 430 Gene3D - 190 302 - -
Lal23g1504 430 SUPERFAMILY Cyclin-like 165 301 IPR036915 -
Lal23g1504 430 PANTHER CYCLINS 21 424 IPR039361 -
Lal23g1504 430 Pfam Cyclin, N-terminal domain 177 302 IPR006671 -
Lal23g1504 430 Gene3D - 176 416 - -
Lal23g1504 430 SMART Cyclin_C_2 304 421 IPR004367 -
Lal23g1504 430 SMART cyclin_7 308 390 IPR013763 -
Lal23g1504 430 SMART cyclin_7 211 295 IPR013763 -
Lal23g1504 430 PIRSF Cyclin_A_B_D_E 2 429 IPR039361 -
Lal23g1504 430 ProSitePatterns Cyclins signature. 206 237 IPR006671 -
Lal23g1504 430 CDD CYCLIN 205 294 IPR013763 -
Lal23g1504 430 Pfam Cyclin, C-terminal domain 304 417 IPR004367 -
Lal23g1504 430 SUPERFAMILY Cyclin-like 303 421 IPR036915 -
Lal23g1504 430 PANTHER CYCLIN-B2-1 21 424 - -
Lal23g1504 430 CDD CYCLIN 302 389 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1504 Lal-Chr23 15262067 15265508 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1504 1 425 Core Cell Cycle Gene Families AT1G20610 56.782 6.57e-169 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1504 K21777 - gmx:100798068 655.595