Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1494 ATGGTGATGGAGCAAGATATTGAGAGTTGCGGGAGCAGAGCGGTGAAATCGTCGCAAAATGCTCATGCTCGTCATCACCGTCAGAAATTGGAGGTTTACAATGAGGTGCTTCGTCGAATTCAAGATTCCGATTGCGAGGAAGCTTTTGTTCCTGGCTTCGACGATCAGCTCTGGCTTCACTTCAATCGTCTTCCTGCTAGGTACGCATTGGATGTGAATGTGGAGAGGGCAGAAGATGTTCTTGCTCATAAGAGATTGCTTAAGTTGGCAGAGGACCCTAGCAACCAACCTGCATTTCAAGTTCGCGTAGTACAGGTATATCCTTCTGGCAGTGCAATTGATTCTGTGCATTCAGATCCTTCTGAGAAAGAAGATGCACAAAGTTCTCTTAACTATTCTTTTAAGCAGGGAATTCATCCACCACCTACTTTTGGTTCACCCTCTAATCTTGAAGCTGTTCCACTTCATACAACTAAAAATAACATTGAAGATGGGGGCAGTACTATGGGCATGACACCATATTTTCCACGGTCCATGCACGAGATTACCTTTTCAACAATTGACAAGCCCAAACTCCTTAGTCAGTTAACTTCAATACTTGGTGAGATGGGACTTAACATTCAAGAAGCTCATGCATTTTCCACCACTGATGGGTTTTCTCTAGATGTTTTTGTCGTCGAGGGATGGCCAAGCGAGGAAACCGAGGAGCTTAAAGGTGTGTTGGAAAAGGAAATTTTGAAGGTTAAGGAGCAATATCTGTCAAGTCAGGGCATACTTCCTGCTACTAATGAACAATACCAGGCAAGGATGGAACTCTCCCCCCATTGCATACAGATACCTTCTGATGGAGCTGATGTGTGGGAAATTGATACCAATCAATTGATCTATGGAAACAGAGTTGGCTCTGGGTCATTCGGTGACTTGTACAGAGGTACATATTGCAGCCAAGATGTGGCTATCAAAGTTCTAAAGCCTGAGCGCATAAGTACAGATATGCTGAAAGAGTTTGCACAGGAAGTCTATATCATGAGGAAGATTCGACACAAGAATGTAGTTCAGTTCATCGGTGCATGTACCCGACCACCAAATCTTTGTATTGTTACTGAGTTTATGTCTAGAGGGAGCTTATACGACTATCTGCACAAACAAAGGGGTGTATTTAAACTTCAATCTTTACTAAAAATAGCGACTGATGTTTCCAAGGGAATGAACTATTTGCACCAAAATAATATAATTCACAGGGACCTCAAGACTGCCAATCTTCTGATGGATGAAAATGAATTAGTCAAGGTGGCTGATTTTGGGGTTGCTAGAGTGCAAACTCAGTCTGGAGTGATGACAGCTGAAACTGGAACATACCGCTGGATGGCACCAGAGGTCATTGAACACAAACCATATGGTCAGAAGGCAGATGTTTTCAGTTTTGGAATATCTCTTTGGGAGCTTTTAACTGGAGAACTGCCTTACTCTCACTTGACCCCATTACAAGCTGCTGTTGGCGTCGTGCAGAAGGGCTTACGGCCTACAATCCCCAAAAATACACATGCAAGACTTTCTGAATTGCTCCAACACTGCTGGAAACAAGATCCAATGGAGAGACCGAATTTTGCCGAAATAATAGAAATTCTTTGGCAGATAACAAACGAGGTCAATGATGGAAAAACAGATGAACAAAAAGATAAGGCATCTAATTCCTTTCTCTCATCATTTAAACGATCTCATCACTGA 1728 0.4271 MVMEQDIESCGSRAVKSSQNAHARHHRQKLEVYNEVLRRIQDSDCEEAFVPGFDDQLWLHFNRLPARYALDVNVERAEDVLAHKRLLKLAEDPSNQPAFQVRVVQVYPSGSAIDSVHSDPSEKEDAQSSLNYSFKQGIHPPPTFGSPSNLEAVPLHTTKNNIEDGGSTMGMTPYFPRSMHEITFSTIDKPKLLSQLTSILGEMGLNIQEAHAFSTTDGFSLDVFVVEGWPSEETEELKGVLEKEILKVKEQYLSSQGILPATNEQYQARMELSPHCIQIPSDGADVWEIDTNQLIYGNRVGSGSFGDLYRGTYCSQDVAIKVLKPERISTDMLKEFAQEVYIMRKIRHKNVVQFIGACTRPPNLCIVTEFMSRGSLYDYLHKQRGVFKLQSLLKIATDVSKGMNYLHQNNIIHRDLKTANLLMDENELVKVADFGVARVQTQSGVMTAETGTYRWMAPEVIEHKPYGQKADVFSFGISLWELLTGELPYSHLTPLQAAVGVVQKGLRPTIPKNTHARLSELLQHCWKQDPMERPNFAEIIEILWQITNEVNDGKTDEQKDKASNSFLSSFKRSHH 575
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1494 575 SUPERFAMILY Protein kinase-like (PK-like) 273 544 IPR011009 -
Lal23g1494 575 CDD ACT_TyrKc 179 246 - -
Lal23g1494 575 PRINTS Tyrosine kinase catalytic domain signature 368 381 IPR001245 GO:0004672|GO:0006468
Lal23g1494 575 PRINTS Tyrosine kinase catalytic domain signature 405 423 IPR001245 GO:0004672|GO:0006468
Lal23g1494 575 PRINTS Tyrosine kinase catalytic domain signature 451 461 IPR001245 GO:0004672|GO:0006468
Lal23g1494 575 PRINTS Tyrosine kinase catalytic domain signature 470 492 IPR001245 GO:0004672|GO:0006468
Lal23g1494 575 PRINTS Tyrosine kinase catalytic domain signature 514 536 IPR001245 GO:0004672|GO:0006468
Lal23g1494 575 ProSitePatterns Protein kinases ATP-binding region signature. 300 321 IPR017441 GO:0005524
Lal23g1494 575 ProSiteProfiles Protein kinase domain profile. 294 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g1494 575 MobiDBLite consensus disorder prediction 553 575 - -
Lal23g1494 575 SMART serkin_6 294 545 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g1494 575 ProSitePatterns Serine/Threonine protein kinases active-site signature. 411 423 IPR008271 GO:0004672|GO:0006468
Lal23g1494 575 ProSiteProfiles ACT domain profile. 181 256 IPR002912 -
Lal23g1494 575 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 16 560 - -
Lal23g1494 575 Pfam Protein tyrosine and serine/threonine kinase 296 543 IPR001245 GO:0004672|GO:0006468
Lal23g1494 575 SUPERFAMILY ACT-like 178 243 IPR045865 -
Lal23g1494 575 Gene3D Transferase(Phosphotransferase) domain 1 373 574 - -
Lal23g1494 575 Coils Coil 231 251 - -
Lal23g1494 575 Gene3D Phosphorylase Kinase; domain 1 284 372 - -
Lal23g1494 575 CDD STKc_MAP3K-like 300 543 - -
Lal23g1494 575 PANTHER ACT-LIKE TYROSINE KINASE FAMILY PROTEIN 16 560 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1494 Lal-Chr23 15205411 15213748 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1494 2 574 MAP Kinase Kinase Kinase AT4G35780 67.188 0.0 777
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Lal23g1494 PK_Tyr_Ser-Thr 1.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1494 - - gmx:100816767 1005.74