Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1471 ATGGGTGACACAGTGAAGCAATTGTTAATAAAACCGATCCAGGTGGCAGACCAAGTATGCAAAGCTGCTGAAGAAACCACTTCCTTCAAACAAGAATGTTTAGAACTCAAATCCAAAACTGAAAAACTCGTCACCCTACTCCGTCAGGCGGCGCGTGCAAGGTCCGACCTTTATGAACGTCCCGCACGCCGCATCATTCAAGATACCCAACACGTTCTCGATAAAACCCTCTCTCTTGTCCTCAAGTGTCGTGCCAACGGCCTCGTCAAGCGCGTGTTCACCATCATCCCCACTGTCTCATTTCGCAAAATCTCTTCCTCATTGGAAAACTCTATCGGAGATGTTTCCTGGCTCCTCCGTATCTCCACCCCCGTTGACGACCGCGCCGACGCAGATACTCACTTTGGTCTCCCTCCAATTGCATCCAATGTGCCGATTCTCGGTTTAATTTGGGAGCAGATTGCTTTACTCTACACCGGCTCGCCGGAGGACAGGTCCGACGGTGCTGCCTCCCTCGTTTCGATCATCCGCGGCAATGAACGGTACGCGACGATGATCATTGAGGAAGGCGGGGTGGGACCCTTGTTGAAATTATTGAAGGAAGGAAAAGCAGAAGGTCAAGAAAATGGTGCAAGGGCTATTGGTCTTTTGGGTCGTGATCCTCAAAGTGTGGAACATATGATTCATATGGGTGTGTGTTCTGTGTTTGCTAAAGTCCTCAAAGAAGGTCCAATGAAAGTTCAAATTGTTGTGGCTTGGGCTGTTTCTGAACTTGTTTCTAATCACCCTAATTGTCAAGATTCTTTTGCTCAGCAGAATATTATAAGGTTACTTGTTAGCCACCTTGCTTTTGAAACTGTTCAGGAACATAGTAAATATACTGTTGTTAGCAATAAACCAACTTCAATTCATGCTGCTTATGTCATGGCTACTAGTATAAAAAATAGTCTTAGTTCTAGTAATTTGAACAAGGGGAGTAATAAGGAGGAGGAGGAGGAGGAGGAGCGAGTACGGAATCAGGTGTCACATTCATTTGGTAATGCTAAAGCTGGAGATCAATTGCATACTGTGGTTGCGAGTACGGTTGCGGTTCATAATACAGCAGGGAAACTACAAGATACTAATCATGCAATTGAACTGAAAGAGTTATTTCAGAGGAGTGGTTCGACTAAGAGCAATGGTAGTGGAAAGCTAGACCATCCTCATCATCAGGATAGTTATTCGCATTCAGGATCTAGCATAAAGGGAAGGGAGCTTGAAGATGCTGACACTAAAGCCAGCATGAAGGAAATGGCAGCAAGGGCACTCTGGCAACTAGCTAAGGGTAATTCACAGATTTGTCATAGTATAACAGAATCAAGGGCTCTGCTGTGTTTCGCGGTTCTCCTTGAAGGGGGAACTGAAGCTGTGCAGTACAATTCCGCCATGGCGTTGATGGAGATTACGGCCGTGGCAGAGAAAGATGCTGATTTGAGGAGATCTGCTTTCAAGCCAACCTCTCCAGCTTGCAAAGCAGTTGTTGATCAAATGATTAAGATAGTTGAGAAAGCAGATTCAGACCTCCTTATTCCTTGCATGAAGGCTATTGGGAATTTGGCTAGGACATTCAAGGCTAAAGAGACAAGGATGATTGGTCCTTTGGTGAGACTTCTTGAAGAATCAGAGACAGAGGTAGTAAAGGAGGCAATAATAGCACTAACAAAATTTGCCTGCACTGAGAACTACCTTCATGTTGATCACTCGAAGGCGATTATAAGCGAAGGTGGGGCTAAACACTTGATTCAGCTTGTATACTTTGGAGAACAGGTAATTCAGAACCCAGCATTAGTTTTGTTATCCTACATTGCATTGAATGTGCCAGACAGTGAAGAGCTTGCTGAGGCTCAGGTTCTTGGAGTGCTTGAATGGGCATGCAAACAAGCTTCCATGATACAGGATGAAACCCGAGAAGCATTGTTGCACGAGTCCAGGAGTAAGTTGGAGCTTTACCAGTCTAGAGTTTGA 2004 0.4516 MGDTVKQLLIKPIQVADQVCKAAEETTSFKQECLELKSKTEKLVTLLRQAARARSDLYERPARRIIQDTQHVLDKTLSLVLKCRANGLVKRVFTIIPTVSFRKISSSLENSIGDVSWLLRISTPVDDRADADTHFGLPPIASNVPILGLIWEQIALLYTGSPEDRSDGAASLVSIIRGNERYATMIIEEGGVGPLLKLLKEGKAEGQENGARAIGLLGRDPQSVEHMIHMGVCSVFAKVLKEGPMKVQIVVAWAVSELVSNHPNCQDSFAQQNIIRLLVSHLAFETVQEHSKYTVVSNKPTSIHAAYVMATSIKNSLSSSNLNKGSNKEEEEEEERVRNQVSHSFGNAKAGDQLHTVVASTVAVHNTAGKLQDTNHAIELKELFQRSGSTKSNGSGKLDHPHHQDSYSHSGSSIKGRELEDADTKASMKEMAARALWQLAKGNSQICHSITESRALLCFAVLLEGGTEAVQYNSAMALMEITAVAEKDADLRRSAFKPTSPACKAVVDQMIKIVEKADSDLLIPCMKAIGNLARTFKAKETRMIGPLVRLLEESETEVVKEAIIALTKFACTENYLHVDHSKAIISEGGAKHLIQLVYFGEQVIQNPALVLLSYIALNVPDSEELAEAQVLGVLEWACKQASMIQDETREALLHESRSKLELYQSRV 667
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1471 667 SUPERFAMILY ARM repeat 154 640 IPR016024 -
Lal23g1471 667 MobiDBLite consensus disorder prediction 325 340 - -
Lal23g1471 667 PANTHER ARMADILLO REPEAT ONLY 2 1 666 - -
Lal23g1471 667 MobiDBLite consensus disorder prediction 318 345 - -
Lal23g1471 667 Gene3D - 153 337 IPR011989 -
Lal23g1471 667 SMART arm_5 577 617 IPR000225 GO:0005515
Lal23g1471 667 SMART arm_5 443 483 IPR000225 GO:0005515
Lal23g1471 667 SMART arm_5 531 571 IPR000225 GO:0005515
Lal23g1471 667 SMART arm_5 179 219 IPR000225 GO:0005515
Lal23g1471 667 SMART arm_5 220 260 IPR000225 GO:0005515
Lal23g1471 667 Gene3D - 498 648 IPR011989 -
Lal23g1471 667 Gene3D - 3 121 IPR036537 GO:0007166
Lal23g1471 667 PANTHER ARMADILLO REPEAT ONLY 4 1 666 - -
Lal23g1471 667 MobiDBLite consensus disorder prediction 388 423 - -
Lal23g1471 667 Gene3D - 417 497 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1471 Lal-Chr23 15061708 15063711 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1471 - - gmx:100794693 862.833
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1471 23 15061708 15063711 Lal23g1471 23 15061708 15063711 ECH
Lal16g0138 16 820357 821611 Lal23g1471 23 15061708 15063711 LSH
Lal15g1516 15 17296118 17299483 Lal23g1471 23 15061708 15063711 LSH
Lal15g0465 15 3164268 3166142 Lal23g1471 23 15061708 15063711 LSH
Lal23g1471 23 15061708 15063711 Lal15g1516 15 17296118 17299483 PCT