Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1463 ATGGAAGCTCAACAACCAAATGAGGATGGGAGCAGTGGAAAAGGGGGATTAATCAGCAGGCAAAGTAGTACAAGGTGGACTCCAACAACAGACCAGATAAGAATATTGAAAGACCTTTACTACAATAATGGAATAAGATCCCCAAGTGCTGAACAGATTCAGAGGATCTCTGCTAGGCTAAGGCAGTACGGTAAGATTGAAGGCAAGAATGTCTTTTATTGGTTCCAAAACCACAAAGCAAGAGAAAGACAGAAGAAAAGGTTCACTTCTGATGTTCTCATGCAAAGAGGCCCAACCAACACTGCTTCTACTTCTAAACATGACCAACCACCCATTCACACTAACTATTCTAACATAGCCTCCACTGGGGGTTCTTCCATACCATCTTCTTCTGCTACTGGAATGGTTAATATGGGCCACATGGGAAACTATGGGTTTGGATCTGTGCCCATGGAAAAGAGTTTTAGGGACTGTTCAATAACAGCTGGAGGTAGCAGTAGCCATTTTGGTAGTGCTATAAACCATAATTTGGGATACTTTGGTATGGACCAATGTTCTTCAGCCTACACTTTCATTGACAAAATAAGGCCAAATGAAGAAACCATGGAAGAAGAACAAGTAGAGGATGGTTCCCATGAGATTCAAACACTCCCTTTATTCCCTGTGCACTGTGAAGACATTCATGGCTATTGTAACCTCAAGTCTAACTCTTCTAACTATGTTAGTGGCTGGTATCAGACAGAGGATGGTTTCATGAATGGTTCCCGAGCTTCCTTGGAACTCAGTCTCAACTCCTATGCCCGCAAATCACCAGATTTCTCTTAA 825 0.4242 MEAQQPNEDGSSGKGGLISRQSSTRWTPTTDQIRILKDLYYNNGIRSPSAEQIQRISARLRQYGKIEGKNVFYWFQNHKARERQKKRFTSDVLMQRGPTNTASTSKHDQPPIHTNYSNIASTGGSSIPSSSATGMVNMGHMGNYGFGSVPMEKSFRDCSITAGGSSSHFGSAINHNLGYFGMDQCSSAYTFIDKIRPNEETMEEEQVEDGSHEIQTLPLFPVHCEDIHGYCNLKSNSSNYVSGWYQTEDGFMNGSRASLELSLNSYARKSPDFS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1463 274 Gene3D - 18 84 - -
Lal23g1463 274 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 1 268 IPR044555 GO:0003700|GO:0099402
Lal23g1463 274 SUPERFAMILY Homeodomain-like 17 91 IPR009057 -
Lal23g1463 274 ProSiteProfiles 'Homeobox' domain profile. 19 85 IPR001356 GO:0003677
Lal23g1463 274 PANTHER PROTEIN WUSCHEL 1 268 - -
Lal23g1463 274 SMART HOX_1 21 89 IPR001356 GO:0003677
Lal23g1463 274 Pfam Homeodomain 23 84 IPR001356 GO:0003677
Lal23g1463 274 MobiDBLite consensus disorder prediction 1 26 - -
Lal23g1463 274 CDD homeodomain 24 86 IPR001356 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1463 Lal-Chr23 14984720 14986140 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1463 20 226 Wox Gene Family AT2G17950 42.000 3.14e-45 152
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Lal23g1463 Homeodomain 1.6e-17 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1463 - - vra:106776674 401.749
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0142 16 851954 853407 Lal23g1463 23 14984720 14986140 LSH
Lal15g0101 15 707484 708935 Lal23g1463 23 14984720 14986140 LSH