Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1461 ATGGGTATTAAAATATCTAATAAACTACCACAAGGTGTTGTTATCAGGCAAATTCTCAAAAGATGTTCAAGTTTTGGAAAAAAACAAAGCTACAACAATAATGAAGAGGGTCTTCCTGATGATGTACCAAAAGGCCATTTTGCTGTGTATGTTGGAGAGAATAGGAGCAGGTACATTATCCCAATTTCATGGCTGGCTCATCCACACTTTCAAAGTCTACTCAAAAGAGCTGAGGAGGAGTTTGGGTTCAATCATCATATGGGACTTACCCTTCCATGTGATGAAGTTGTGTTACAAGCAAAAGGTGAAAAAGCAAATGAAGAACTGATAAGATTCTTAGCCAAAATTGTAAACTTTATATCATATCGCATTACAGAGAGGAATGAGGTGGAGTGGAACTTCACACTCCCTCTTACATTGAAGCCTGTATAA 432 0.375 MGIKISNKLPQGVVIRQILKRCSSFGKKQSYNNNEEGLPDDVPKGHFAVYVGENRSRYIIPISWLAHPHFQSLLKRAEEEFGFNHHMGLTLPCDEVVLQAKGEKANEELIRFLAKIVNFISYRITERNEVEWNFTLPLTLKPV 143
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1461 143 PANTHER AUXIN-INDUCED PROTEIN-LIKE-RELATED 6 99 IPR003676 GO:0009733
Lal23g1461 143 PANTHER AUXIN-INDUCED PROTEIN 15A-LIKE 6 99 - -
Lal23g1461 143 Pfam Auxin responsive protein 26 99 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1461 Lal-Chr23 14967820 14969256 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1461 6 99 Calmodulin-binding Proteins AT4G34750 44.681 1.57e-18 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1461 K14488 - gmx:100798840 171.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal4g0072 4 423699 424016 Lal23g1461 23 14967820 14969256 ECH
Lal21g0118 21 811081 811404 Lal23g1461 23 14967820 14969256 ECH
Lal8g0543 8 3709224 3709541 Lal23g1461 23 14967820 14969256 ECH
Lal10g0878 10 16311661 16311981 Lal23g1461 23 14967820 14969256 ECH
Lal23g1461 23 14967820 14969256 Lal23g1461 23 14967820 14969256 ECH
Lal1g0186 1 1124795 1125115 Lal23g1461 23 14967820 14969256 ECH
Lal2g0108 2 667944 668264 Lal23g1461 23 14967820 14969256 ECH
Lal15g1507 15 17201197 17201502 Lal23g1461 23 14967820 14969256 LSH