Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1457 ATGATGGAGCCGATGGAGTCATGTGTCCCACCAGGGTTTCGGTTTCACCCAACAGATGAAGAACTTGTTGGTTATTATCTCAGGAAGAAAGTAGCTTCTCAGAAGATTGACCTTGATGTTATCAGAGAGATCGATCTATATCGTATTGAACCATGGGATCTAATAGAGAGATGCAGGATCGGGTATGAAGAGCAGAATGAGTGGTATTTCTTCAGCCACAAAGATAAGAAGTATCCAACAGGAACAAGAACGAATAGAGCTACCATGGCAGGGTTCTGGAAAGCAACTGGGAGAGACAAGTCAGTGTATGATAAGACCAAATTGATAGGGATGAGGAAGACTCTTGTTTTCTACAAAGGAAGAGCCCCTAATGGCCAGAAAACGGATTGGATCATGCATGAATATAGGCTTGAATATGATGATAATGGACCTCCACAGGAGGAAGGATGGGTTGTATGCAGAGCTTTCAAGAAAAAAACTAACAATGGCCAGAGTAAGACTATCCAAGGATGGGATTCAAGCTCTTTCTACAACGAAGAAAGTGTAGTAATCTCTATGGTGGATCCAATTGATCTCATGTCAATTCAGCCTCAGAGCTTCTTAGCTCAAAGTTTAATGTGCAAGCAAGAGATAGAAGCATCAGCAGAAAACTTGAGCTGCATGCATCCTCATAATGCAGAACAATTTATACAGCTTCCTCAGCTAGAAAGCCCTTCTTTACCATTTGCAAAGAGGCCAAGCACATTGCCCACCGAAGAAGATGATCAAAACAAGAAAAAGAAAGTAACTACTGATTGGAGAGATCTTGACAAATTTGTGGCTTCTCAACTGAGTCAAGAAGATCACAGGCATGAAACTGATCATGGAGTACTGTTGTCAAGTTTTGAAAATCATACAAACTCTGACATGGCATTGCTGCTTCTGCAGAATAGTAGGGATGATGAAGGACACAAGTTAAACCCATTTTTAAATGCAAGCTCGGACTCTGATATTGGGATATGCGTATTTGAAAAATGA 1017 0.41 MMEPMESCVPPGFRFHPTDEELVGYYLRKKVASQKIDLDVIREIDLYRIEPWDLIERCRIGYEEQNEWYFFSHKDKKYPTGTRTNRATMAGFWKATGRDKSVYDKTKLIGMRKTLVFYKGRAPNGQKTDWIMHEYRLEYDDNGPPQEEGWVVCRAFKKKTNNGQSKTIQGWDSSSFYNEESVVISMVDPIDLMSIQPQSFLAQSLMCKQEIEASAENLSCMHPHNAEQFIQLPQLESPSLPFAKRPSTLPTEEDDQNKKKKVTTDWRDLDKFVASQLSQEDHRHETDHGVLLSSFENHTNSDMALLLLQNSRDDEGHKLNPFLNASSDSDIGICVFEK 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1457 338 SUPERFAMILY NAC domain 5 158 IPR036093 GO:0003677|GO:0006355
Lal23g1457 338 ProSiteProfiles NAC domain profile. 9 158 IPR003441 GO:0003677|GO:0006355
Lal23g1457 338 Pfam No apical meristem (NAM) protein 10 137 IPR003441 GO:0003677|GO:0006355
Lal23g1457 338 MobiDBLite consensus disorder prediction 248 262 - -
Lal23g1457 338 PANTHER NAC DOMAIN-CONTAINING PROTEIN 82-RELATED 7 317 - -
Lal23g1457 338 PANTHER NAC DOMAIN-CONTAINING PROTEIN 76 7 317 - -
Lal23g1457 338 Gene3D NAC domain 18 163 IPR036093 GO:0003677|GO:0006355
Lal23g1457 338 MobiDBLite consensus disorder prediction 240 262 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1457 Lal-Chr23 14939948 14945146 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1457 2 337 NAC Transcription Factor Family AT2G18060 61.957 2.95e-156 441
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lal23g1457 NAM 4.3e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1457 - - aprc:113869508 543.888
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1457 23 14939948 14945146 Lal23g1457 23 14939948 14945146 ECH
Lal15g0106 15 732880 737837 Lal23g1457 23 14939948 14945146 LSH
Lal23g1457 23 14939948 14945146 Lal23g0112 23 1108739 1109149 PCT
Lal23g0112 23 1108739 1109149 Lal23g1457 23 14939948 14945146 PCT