Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1450 ATGGATTCCCTTCTAAAAAACCAAACCATATACAACATTGAACTAGAACCACTCCACATGGTTGTGTTGCTGTTCGTTGTCCCACTCATCTTGCTCTTAGTCTTAGGTTTACTCTCTCGAATTCGTGGAAGGCCACCATATCCACCAGGACCAAAAGGGTTACCCATTATAGGTAACATGCTGATGATGGACCAGTTAACACACCGTGGCTTGGCCAACATAGCCAAGAAATACGGTGGCATCTTCCACCTTCGCATGGGGTTCCTTCACATGGTTACTATTTCAGATGCAGAAGCAGCACGTCAAGTTCTCCAAGTCCAAGACAACATCTTTTCTAACCGACCAGCTACCATAGCCATAAGCTATCTTACTTATGACCGTGCAGACATGGCTTTCGCTCACTATGGTCCCTTTTGGCGTCAGATGCGCAAGCTCTGTGTCATGAAGCTCTTCAGTCGCAAGCGTGCTGAGTCATGGCAATCAGTGAGGGACGAAGTTGACACAGTTGTCAGAACCGTTGTGGCCAACACCGGGAATCCAGTGAATATAGGTGAGTTAGTGTTCAACCTCACAAAAAATATAATATACCGAGCGGCGTTTGGTTCTAGCTCGCAAGAAGGGCAAGATGAGTTCATAGGGATACTTCAAGAGTTCTCTAAGTTGTTTGGAGCTTTCAACATCGCTGATTTCATACCCTATCTTGGAGGAATTGATCCTCAAGGCCTCAACACCAGGCTCGCCAAGGCACGTGGATCGTTGGATAGCTTCATAGACAAGATCGTGGATGAACATATAGTGAAGAAGAAGAAGAGGATTAAGAGTGAAAATGTTGGTAGTGGAGATGAAGAAAGTGACATGGTGGATGAGTTGTTAGCTTTCTACAGTGAAGAAGCTGAAGTAAATGAATTGGATGATCCAGCTCATACATCTATCAAACTCACTAAAGATAACATCAAGGCTATCATCATGGATGTGATGTTTGGAGGAACAGAGACAGTGGCGTCAGCAATTGAATGGGCCATGGCAGAGTTAATAAGAAGCCCAGATGATTTGAAAAGAGTTCAACAAGAGCTCACTGATGTTGTGGGCTTAGCCCGACGGGTCGAAGAATCTGACTTCGACAAACTCACTTACCTCAAATGTGTCATCAAAGAGACCCTCCGCCTCCACCCACCTATCCCCCTCCTCCTCCATGAGACGGCGGAGGACACTGCCATCAACGGCTACTTCGTCCCCAAAAAATCACGCGTCATGATCAACGCGTGGGCTATTGGGAGGGACAATAACTGTTGGGACGAACCCGAAGTTTTTAAACCGGCACGGTTCTTAAAATTGGGAGTGCCAGATTTTAAAGGGAGCAACTTTGAGTTCATTCCTTTCGGGTCGGGTCGCAGATCCTGCCCTGGGATGCAGTTAGGGCTCTACGCGCTTGAATCGGCGGTGGCTCACCTCCTTCATTGCTTCACGTGGGAGTTACCAGATGGAATGAAACCAATTGAGATGGATATGAGTGACGTGTTCGGACTCACCGCTCCTTTGGCGAGTCGACTCATTGCTGTACCCACTAAGCGCGTGGTGTGCCCTCTAGTCTAG 1593 0.4727 MDSLLKNQTIYNIELEPLHMVVLLFVVPLILLLVLGLLSRIRGRPPYPPGPKGLPIIGNMLMMDQLTHRGLANIAKKYGGIFHLRMGFLHMVTISDAEAARQVLQVQDNIFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRAESWQSVRDEVDTVVRTVVANTGNPVNIGELVFNLTKNIIYRAAFGSSSQEGQDEFIGILQEFSKLFGAFNIADFIPYLGGIDPQGLNTRLAKARGSLDSFIDKIVDEHIVKKKKRIKSENVGSGDEESDMVDELLAFYSEEAEVNELDDPAHTSIKLTKDNIKAIIMDVMFGGTETVASAIEWAMAELIRSPDDLKRVQQELTDVVGLARRVEESDFDKLTYLKCVIKETLRLHPPIPLLLHETAEDTAINGYFVPKKSRVMINAWAIGRDNNCWDEPEVFKPARFLKLGVPDFKGSNFEFIPFGSGRRSCPGMQLGLYALESAVAHLLHCFTWELPDGMKPIEMDMSDVFGLTAPLASRLIAVPTKRVVCPLV 530
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1450 530 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506|GO:0016705
Lal23g1450 530 PRINTS P450 superfamily signature 328 345 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1450 530 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1450 530 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1450 530 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1450 530 PRINTS E-class P450 group I signature 75 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1450 530 PRINTS E-class P450 group I signature 99 120 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1450 530 PRINTS E-class P450 group I signature 190 208 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1450 530 PRINTS E-class P450 group I signature 317 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1450 530 PRINTS E-class P450 group I signature 337 363 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1450 530 PRINTS E-class P450 group I signature 380 398 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1450 530 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1450 530 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1450 530 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1450 530 PANTHER CYTOCHROME P450 FAMILY FERULATE HYDROXYLASE 18 529 - -
Lal23g1450 530 PANTHER CYTOCHROME P450 84A1-RELATED 18 529 - -
Lal23g1450 530 Gene3D Cytochrome P450 41 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1450 530 SUPERFAMILY Cytochrome P450 42 524 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1450 530 Pfam Cytochrome P450 48 511 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1450 Lal-Chr23 14878288 14881353 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1450 55 529 Monolignol Biosynthesis Gene Families AT4G36220 75.579 0.0 756
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1450 K09755 - gmx:100783430 809.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1450 23 14878288 14881353 Lal23g1450 23 14878288 14881353 ECH
Lal15g0111 15 783132 786296 Lal23g1450 23 14878288 14881353 LSH