Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1437 ATGGCGGGTATATTCTCACTAGGCGGTGGTAGTGGTAGTGGTAGTGGTGGTGGAGGAGGAGGAGGGAGAGGAAACAATAACAACAACAACAACAACCCGCAAGATAATGAACAACAACCCACAGATTTCTCTCCTCAAGCAGAAACGTTATTTTGGTATAACAAGAGCGTGGAAGATGTTAGAGGTTTGGAGTTATGGCAGCACCACCAACAACCTCAAATCCCTCAAGGGAGACCTATTTTCCATCAAGATCTTTACTCCTTAGGGGTGGGACCTAGCAGAGGTTCCGATGCGGTGGCGAGTTCAGGCGGAGGAGGGATTAGTTGTCAAGATTGTGGGAACCAAGCAAAGAAAGATTGCCCTCACATGAGGTGTAGGACTTGTTGCAAGAGCCGTGGCTATGATTGCCAAACCCATGTTAAGAGCACTTGGGTTCCTGCTTCTAAGCGTCGAGAAAGACTTCAACAACAACAGCATCAGCAGCAGCAACATCACACAGAGAGAGATCATAACCCCACCTCTTCTCGTTTGCGTTCTAACCCTACAACCTCACCCTCAGGGTTAGAGCATACAAATTTTCCAGCTATGGTGAGTTCTCCAGCTGAGTTCAGATGTGTAAGAGTTAGTTCCATAGAGGACACTGAGGAACAATATGCTTATCAAACAGCTGTGAACATTGGAGGGCATGTGTTCAAGGGAATTCTCTATGACCAAGGTCCAGATCATAGCACTAGTAGTTACACCGGTGGAGAAAGCTCCTCCACCCGTGTACTTGGCAGTGGAGGAGCTCAGTCTTCGAACCTCATTGCCGCTGCTACCACCACCGGAGCACTTGTGGATCCTTCTTTCTTGTATCCGCCTCAACTTAACACATTCATGCCTCCTTGTGGTACGCAATTCTTCCCTCACCAAAGATCATGA 921 0.4788 MAGIFSLGGGSGSGSGGGGGGGRGNNNNNNNNPQDNEQQPTDFSPQAETLFWYNKSVEDVRGLELWQHHQQPQIPQGRPIFHQDLYSLGVGPSRGSDAVASSGGGGISCQDCGNQAKKDCPHMRCRTCCKSRGYDCQTHVKSTWVPASKRRERLQQQQHQQQQHHTERDHNPTSSRLRSNPTTSPSGLEHTNFPAMVSSPAEFRCVRVSSIEDTEEQYAYQTAVNIGGHVFKGILYDQGPDHSTSSYTGGESSSTRVLGSGGAQSSNLIAAATTTGALVDPSFLYPPQLNTFMPPCGTQFFPHQRS 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1437 306 PANTHER PROTEIN SHORT INTERNODES 1 304 - -
Lal23g1437 306 MobiDBLite consensus disorder prediction 150 193 - -
Lal23g1437 306 TIGRFAM LRP1_Cterm: LRP1 C-terminal domain 193 240 IPR006511 -
Lal23g1437 306 MobiDBLite consensus disorder prediction 20 42 - -
Lal23g1437 306 PANTHER PROTEIN LATERAL ROOT PRIMORDIUM 1 1 304 IPR007818 GO:0003700|GO:0006355
Lal23g1437 306 MobiDBLite consensus disorder prediction 175 193 - -
Lal23g1437 306 MobiDBLite consensus disorder prediction 1 42 - -
Lal23g1437 306 Pfam Domain of unknown function (DUF702) 106 241 - -
Lal23g1437 306 TIGRFAM put_zinc_LRP1: putative zinc finger domain, LRP1 type 108 150 IPR006510 -
Lal23g1437 306 MobiDBLite consensus disorder prediction 150 174 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1437 Lal-Chr23 14801724 14804372 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1437 1 293 C2H2 Transcription Factor Family AT5G66350 44.186 9.90e-70 218
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SRS Lal23g1437 DUF702 7.3e-63 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1437 - - lang:109331278 525.013