Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1431 ATGAAAAGTACTCTTCCTTCTCTGACAGGCTTTCGATTTGGATCAGCATCATCATGGTTCGAGATTTATGCTGCCTTCTCCACATTCATGATGCTTCTCCGAACAGCCATCAATGATCTTCTACCTGAAAACGTTCGAACATTCATCATGGCAAAGCTAGAAGCTTTCTTCTCCCGTATTCAACCAAGTAACATGGTATCTCTCACAATTAACAAATCTTGGGAAGATATGTATGGATACAACAATGAACTTTACAAGGCTGCGTACAGCTACCTTCCCGTAAGAGTAACGGGAACCTACAAATCGCTCAAAGTTGGTAAAGTAGATGACCAGAAAGACCTTGTGTTTGCTGTGGATGGAAAAGAAGAGGTGGTAGATGAATTTGAAGGCGTCAAATTCAAATGGATGCTAGATGATGGTTCAGGAGAGGAAAATAAGGATTCTAACAAACGTGAATTTAAACTAAGCTTCGATGAGAAGCATAGAGAAATAGTGGTAAAAAAGTATATACCATATCTACTTGAAACATATGAGAAAAAGCAGAAAGAATTGAAGACTCTTCACCTCAATTTCTGGGAATCTCCATACTGGACTCAAAGTGATTTTACACATCCTGCCACATTTGACTCACTCGGGTTAGATCCTGAGTTGAAGAAGAGTATAATTGATGACTTAGAAAGGTTCTTGAAGAGAAAAGAAATGTACAAGAAAGTGGGCAAGCCTTGGAAACGTGGCTACTTATTGTATGGTCCTCCCGGAACAGGAAAATCTAGCCTCATTGCAGCCATGGCCAAGTACTTGAAATTTGATGTCTATAATTTAGATCTAAACTCTGTTTTCTCTAATTCAGACCTCATGTTATCCATGAGGAGCACATCAAGACGTTCCATCATTGTGCTTGAAGACATTGACTGCAACAAAGAGGTAACTAGTCGACCAAATGAATCGAAGGACCCTAATGAAGATGATGCCCAAGTTGTTGATGCCAAAGGTGATGATCCCAAGGTTGAGAAGTTTACACTATCTGGTCTACTTAATTGTGTGGATGGTTTGTGGTCAAGCCATGGAGAGGAGAGGATTACGATATTTACTACAAACCATGTAGAAAATATTGATCCAGCATTGCTGCGCCCTGGTCGAATGGACATGCACATTAACTTGTCATTCCTTAAGCCCAAAGCATTCAGAGTCTTAGCCTCCAATTATCTGAACATTCAAGACCATCATCCACTCTTTCAACAGATTGAAGACTTGTTGGACAAAACAGATTTCACCCCTGCAGAAGTGGCAGAGCAGCTAATAAGAAATGAAGATCCTGATATTGCTTTAGAACAACTACTCAAATTTCTCACAGAGAAGAGCCAAGCAAAGAAGGATAATTAG 1383 0.3991 MKSTLPSLTGFRFGSASSWFEIYAAFSTFMMLLRTAINDLLPENVRTFIMAKLEAFFSRIQPSNMVSLTINKSWEDMYGYNNELYKAAYSYLPVRVTGTYKSLKVGKVDDQKDLVFAVDGKEEVVDEFEGVKFKWMLDDGSGEENKDSNKREFKLSFDEKHREIVVKKYIPYLLETYEKKQKELKTLHLNFWESPYWTQSDFTHPATFDSLGLDPELKKSIIDDLERFLKRKEMYKKVGKPWKRGYLLYGPPGTGKSSLIAAMAKYLKFDVYNLDLNSVFSNSDLMLSMRSTSRRSIIVLEDIDCNKEVTSRPNESKDPNEDDAQVVDAKGDDPKVEKFTLSGLLNCVDGLWSSHGEERITIFTTNHVENIDPALLRPGRMDMHINLSFLKPKAFRVLASNYLNIQDHHPLFQQIEDLLDKTDFTPAEVAEQLIRNEDPDIALEQLLKFLTEKSQAKKDN 460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1431 460 ProSitePatterns AAA-protein family signature. 359 377 IPR003960 GO:0005524|GO:0016887
Lal23g1431 460 Gene3D - 386 456 - -
Lal23g1431 460 Gene3D - 198 385 IPR027417 -
Lal23g1431 460 CDD AAA 243 388 - -
Lal23g1431 460 SMART AAA_5 242 391 IPR003593 -
Lal23g1431 460 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 174 438 IPR027417 -
Lal23g1431 460 MobiDBLite consensus disorder prediction 309 329 - -
Lal23g1431 460 PANTHER BCS1 AAA-TYPE ATPASE 12 454 - -
Lal23g1431 460 Pfam Domain associated at C-terminal with AAA 41 136 IPR025753 -
Lal23g1431 460 Pfam ATPase family associated with various cellular activities (AAA) 247 387 IPR003959 GO:0005524|GO:0016887
Lal23g1431 460 PANTHER NUCLEOSIDE TRIPHOSPHATE HYDROLASE SUPERFAMILY PROTEIN, PUTATIVE-RELATED 12 454 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1431 Lal-Chr23 14768712 14770631 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1431 244 387 Calmodulin-binding Proteins AT3G56690 26.316 6.36e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1431 - K08900 gmx:100789094 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1431 23 14768712 14770631 Lal23g1431 23 14768712 14770631 ECH