Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1420 ATGGGATCATCATGGACACCAAGACAAAACAAAATATTTGAAGAAGCCCTTGCTATATATGATAGAGAAACACCTGACAGGTGGCAGAATATTGCAAAAGTGGTGGGAAAACCCGTGGAAGAGATTAAAAGGCACTATGAGATCCTCAAAGAAGATATTAAACGCATTGAGCGTGGTCAAGTCCCTTTTCCTTATACAGTTCTAGGACAAGATAGAGTTTCTAATTTATAG 231 0.3853 MGSSWTPRQNKIFEEALAIYDRETPDRWQNIAKVVGKPVEEIKRHYEILKEDIKRIERGQVPFPYTVLGQDRVSNL 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1420 76 Gene3D - 1 63 - -
Lal23g1420 76 Coils Coil 39 59 - -
Lal23g1420 76 SMART sant 1 52 IPR001005 -
Lal23g1420 76 PANTHER MYB FAMILY TRANSCRIPTION FACTOR-RELATED 1 66 IPR044636 GO:0003700
Lal23g1420 76 SUPERFAMILY Homeodomain-like 3 57 IPR009057 -
Lal23g1420 76 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 66 - -
Lal23g1420 76 CDD SANT 4 50 IPR001005 -
Lal23g1420 76 ProSiteProfiles SANT domain profile. 1 54 IPR017884 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1420 Lal-Chr23 14712257 14713949 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1420 - - lja:Lj4g3v0973380.1 121.709
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1420 23 14712257 14713949 Lal23g1420 23 14712257 14713949 ECH
Lal1g0223 1 1327480 1328772 Lal23g1420 23 14712257 14713949 ECH
Lal9g0159 9 1000589 1001984 Lal23g1420 23 14712257 14713949 ECH
Lal16g0167 16 1017695 1019835 Lal23g1420 23 14712257 14713949 LSH