Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1404 ATGTCTGTCTCACACTTAACCTTGTGTTCTCTTTCTTCTTTCATTCTAGCTCTTCTTCTCATCTTCATTCTCTTCAAAAGAAAGCAAACCAAACCCAAGCTTAACCTTCCCCCTGGCAAAATGGGCTGGCCCTTTATTGGGGAAACCATTGGATACTTGAAGCCTTACTCAGCTACTACAATAGGAGAATTCATGGACCAGCACATAGCAAGGTATGGTAAAATTTACAAGTCCAAACTGTTTGGAGAGCCAGCAATAGTGTCAGCAGATGCAGGATTGAATAGGTTCATATTACAAAACGAAGGAAAATTGTTTGAGTGCAGCTATCCTAGAAGCATTGGTGGAATACTAGGGAAATGGTCTATGTTGGTTTTGGTCGGTGACATGCACAGGGACATGCGGACCATATCACTCAATTTTCTAAGCCATGCCAGGCTCAGAACACATATGATGAAAGACGTGGAGAAACATACCCTTCTGGTTTTAAGGTCTTGGAAAGAAAATTCCACATTCTCAGCTCAAGATGAAGCTAAGAAGTTCACCTTTAATTTGGTGGCGAAACATATCTTGAACTTGGATCCTGGGAATATAGAGACAGAGCAACTAAGGAAAGAGTATGTCACATTCATGAAGGGAGTGGTATCAGTACCTTTGAATTTACCTGGAACTGCATACAGGAAGGCCTTAAAGTCTAGGTGCACAATACTGAAGCTCATAGAAGGGAAAATGGAAGAAAGATTAAAAAGAATCCAAGAGGGAAATGAAAGTTTGGAGGAAGAGGATCTTCTAAACTGGGTTTTGAAACATTCAAGTCTTTCAACTGAGCAGATTCTTGACTTGATTCTCAGTTTGCTCTTCGCTGGCCATGAAACTTCATCAGTATCCATAGCTCTAGCTATTCACTTCTTACCTGGTTGCCCACAAGCTATGCAGCAGTTAAAGGAAGAGCACAGAGAAATCGCCAGAGCCAAGAAACAAGCAGGGAAAGTTGAACTGACTTGGGATGACTATAAAAAAATGGAATTTACTCACTGTGTCGTGAACGAGACACTTCGGTTAGGAAATGTTGTGAGGTTCCTTCACAGGAAGGCTATTAAAGATGTTCGATACAAAGGTTATGATATTCCATGTGGATGGAAAGTCCTTCCAGTGATTGCAGCCGTGCATTTGGATCCTTCACTTTTTGACCAACCTCAACACTTCAATCCATGGAGATGGCAGAACAATGGTAGTCGTGGAAGTTGTCCAAGCATGAGCACAGTGAGCAATAACTTCTTACCGTTCGGGGGAGGACCACGATTATGTGCAGGATCAGAGTTAGCAAAGCTTGAAATGGCTGTTTTCATTCACCATCTAATCCTCAATTACCATTGGGAATTAACTGATACTGATGAAGCCTTTGCCTACCCTTTTGTCGATTTTCCCAAAGGCCTACCCATCAAAGTCAAAGCACACTCTTTGCTTTGA 1467 0.4185 MSVSHLTLCSLSSFILALLLIFILFKRKQTKPKLNLPPGKMGWPFIGETIGYLKPYSATTIGEFMDQHIARYGKIYKSKLFGEPAIVSADAGLNRFILQNEGKLFECSYPRSIGGILGKWSMLVLVGDMHRDMRTISLNFLSHARLRTHMMKDVEKHTLLVLRSWKENSTFSAQDEAKKFTFNLVAKHILNLDPGNIETEQLRKEYVTFMKGVVSVPLNLPGTAYRKALKSRCTILKLIEGKMEERLKRIQEGNESLEEEDLLNWVLKHSSLSTEQILDLILSLLFAGHETSSVSIALAIHFLPGCPQAMQQLKEEHREIARAKKQAGKVELTWDDYKKMEFTHCVVNETLRLGNVVRFLHRKAIKDVRYKGYDIPCGWKVLPVIAAVHLDPSLFDQPQHFNPWRWQNNGSRGSCPSMSTVSNNFLPFGGGPRLCAGSELAKLEMAVFIHHLILNYHWELTDTDEAFAYPFVDFPKGLPIKVKAHSLL 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1404 488 Coils Coil 240 260 - -
Lal23g1404 488 Pfam Cytochrome P450 37 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1404 488 PANTHER CYTOCHROME P450 90B1 16 462 - -
Lal23g1404 488 Coils Coil 306 333 - -
Lal23g1404 488 SUPERFAMILY Cytochrome P450 33 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1404 488 PRINTS E-class P450 group I signature 69 88 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1404 488 PRINTS E-class P450 group I signature 276 293 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1404 488 PRINTS E-class P450 group I signature 296 322 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1404 488 PRINTS E-class P450 group I signature 344 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1404 488 PRINTS E-class P450 group I signature 384 408 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1404 488 PRINTS E-class P450 group I signature 425 435 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1404 488 PRINTS E-class P450 group I signature 435 458 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1404 488 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 428 437 IPR017972 GO:0005506|GO:0016705
Lal23g1404 488 PANTHER CYTOCHROME P450 26 16 462 - -
Lal23g1404 488 Gene3D Cytochrome P450 25 484 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1404 488 PRINTS P450 superfamily signature 287 304 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1404 488 PRINTS P450 superfamily signature 345 356 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1404 488 PRINTS P450 superfamily signature 426 435 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Lal23g1404 488 PRINTS P450 superfamily signature 435 446 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1404 Lal-Chr23 14619371 14625022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1404 26 407 Cytochrome P450 AT3G50660 73.945 0.0 630
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1404 23 14619371 14625022 Lal23g1404 23 14619371 14625022 ECH
Lal16g0175 16 1053832 1055191 Lal23g1404 23 14619371 14625022 LSH