Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1400 ATGTCTTCTCCTGATAACTCATCACCCGATAACTCGTCACCTGATAATGCTACACCCGATAATAGTACCCCTGATGATGCTGACAACTCATCATCGCCACCATCATCATCGCAACCACCACCATCATCATCACCACCACCATCTGAACCATCTCCATCACCACCACCACCCGAAAAAGATTCCTCGCCCCCTCCAACACCACCCTCATCCAATAATTCCCCCCCACCACCATCATCATCGAACAATCCACCACCATCATCAAATAGTCCACCCCCACCATCATCATCAAACAATCCAACTCCACCATCATCATCAAACAATCCAACCCCACCATCATCCAATAATGGTTCTCCACCTCCTCCAGCATCATCCGGCCGTTCTCCACCCTCACCTTCTAGTGGATCACCATCACCACCACAACACAAACCATTGCCAAGTAATAATAACGATAATAACAACAAAACACCATCCTCTTCAAAGTCTAATAGTGATAGTGAGAATGGCGACAAGGCAATTGTCGGGGCAGTGCTTGGTGTAGGAGCTTTTCTTCTGGTTCTGGTTATCGTTTGTGTTATTTGCTCCAGGAGGAAGAAGAAAAGAAAACAAATGTACTATTATGGAGAACAAGATGCAAAAGGGAATCACTATTACAATAATAGTGGTCAGCACCCAGTTGGTTATTATGGAGGTCCACGGCATCCGGACCATGTTGTTGGGGTCCAAAGTGGAATGGCTCCTCCTAATAGTGGTTGGGGTGCACCACCTCCACTAATGATGAACAGTGCTGAAATGAGCACCAGTTTCTCAACAGGACCGCCTCCTCTGCCTCCTCCTTCACCGAACCTTGCACTAGGCCTCAAGGGTACCTTCTCTTATGAAGAATTAGCAGCTGCTACCAATGCATTTAATGATCAGAATTTAATAGGACAAGGGGGCTTCGGTTATGTCCACAAAGGGGTGTTGCCTAATGGAAAGGAGATTGCGGTTAAGAGCTTGAAAGCAGGTAGTGGGCAAGGAGAGCGAGAGTTCCAAGCTGAGATTGACATCATTAGCCGTGTTCATCATCGTCATCTTGTGTCACTTGTTGGATATTGTATTGCTGGTGGACAAAGAATGTTGGTCTATGAATTTATTCCCAATAACAATTTAGAACATCACCTTCATGGAAAAGGTGTACCTACCATGGATTGGCCTACTAGAATGCGGATCGCAATAGGATCAGCGAAAGGACTTGCCTATCTTCATGAAGACTGTCATCCACGCATCATTCATCGTGATATCAAAACTGCAAATGTCCTCATTGATGACAGTTTCGAAGCGAAGGTGGCTGATTTTGGATTGGCTAAGTTGACTTCTGACAATAATACACATGTATCAACTCGTGTCATGGGAACTTTCGGGTACCTTGCCCCTGAATATGCATCAAGTGGAAAGTTGACAGAGAAGTCTGATGTTTTCTCATTTGGTGTCATGCTATTGGAACTCATATCTGGGAAGCGACCTGTAGACCTCACAAACACGATGGAGGACAGCTTAGTGGACTGGGCTCGGCCACTACTGGCTCATGGACTGGAGGAGGATCCTGGAAAATTCGGGGAGTTGGTTGATCCATTTTTGGAGGGAAACTACAATGCTCATGAAATGTCAATGATGGCTGCTTGTGCTGCTGGCAGCATTCGCCACTCTGCCAGGAAGCGCCTAAAAATGAGCCAGATTGTGAGAGCGTTGGAAGGAGATGTCTCACTAGACGACTTGAAGGAGGGGATGATGAAGACAGGGGTTACAAATGTTCAAACAACCTCTTCATCTAGCTCGGAAATTCCATATGATACAATGCAATACAATCATGATATGCAAAAGATGCGACATATGGTGTATTCGGGCGAGGTAGGCACTAGCAGTGGCTCTAGCGCCGAAATGAGCCGAATTCAAGAAACCCCAAGGAGGCTGAACTAA 1956 0.4606 MSSPDNSSPDNSSPDNATPDNSTPDDADNSSSPPSSSQPPPSSSPPPSEPSPSPPPPEKDSSPPPTPPSSNNSPPPPSSSNNPPPSSNSPPPPSSSNNPTPPSSSNNPTPPSSNNGSPPPPASSGRSPPSPSSGSPSPPQHKPLPSNNNDNNNKTPSSSKSNSDSENGDKAIVGAVLGVGAFLLVLVIVCVICSRRKKKRKQMYYYGEQDAKGNHYYNNSGQHPVGYYGGPRHPDHVVGVQSGMAPPNSGWGAPPPLMMNSAEMSTSFSTGPPPLPPPSPNLALGLKGTFSYEELAAATNAFNDQNLIGQGGFGYVHKGVLPNGKEIAVKSLKAGSGQGEREFQAEIDIISRVHHRHLVSLVGYCIAGGQRMLVYEFIPNNNLEHHLHGKGVPTMDWPTRMRIAIGSAKGLAYLHEDCHPRIIHRDIKTANVLIDDSFEAKVADFGLAKLTSDNNTHVSTRVMGTFGYLAPEYASSGKLTEKSDVFSFGVMLLELISGKRPVDLTNTMEDSLVDWARPLLAHGLEEDPGKFGELVDPFLEGNYNAHEMSMMAACAAGSIRHSARKRLKMSQIVRALEGDVSLDDLKEGMMKTGVTNVQTTSSSSSEIPYDTMQYNHDMQKMRHMVYSGEVGTSSGSSAEMSRIQETPRRLN 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1400 651 PRINTS Proline rich extensin signature 22 34 - -
Lal23g1400 651 PRINTS Proline rich extensin signature 34 55 - -
Lal23g1400 651 PRINTS Proline rich extensin signature 61 77 - -
Lal23g1400 651 PRINTS Proline rich extensin signature 89 106 - -
Lal23g1400 651 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Lal23g1400 651 PANTHER RECEPTOR-LIKE KINASE 65 641 - -
Lal23g1400 651 MobiDBLite consensus disorder prediction 629 644 - -
Lal23g1400 651 ProSiteProfiles Protein kinase domain profile. 302 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g1400 651 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 65 641 - -
Lal23g1400 651 Pfam Protein tyrosine and serine/threonine kinase 306 504 IPR001245 GO:0004672|GO:0006468
Lal23g1400 651 ProSitePatterns Serine/Threonine protein kinases active-site signature. 422 434 IPR008271 GO:0004672|GO:0006468
Lal23g1400 651 MobiDBLite consensus disorder prediction 629 651 - -
Lal23g1400 651 MobiDBLite consensus disorder prediction 34 143 - -
Lal23g1400 651 MobiDBLite consensus disorder prediction 1 33 - -
Lal23g1400 651 SUPERFAMILY Protein kinase-like (PK-like) 276 576 IPR011009 -
Lal23g1400 651 MobiDBLite consensus disorder prediction 144 167 - -
Lal23g1400 651 Gene3D Phosphorylase Kinase; domain 1 282 377 - -
Lal23g1400 651 SMART serkin_6 302 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g1400 651 MobiDBLite consensus disorder prediction 1 167 - -
Lal23g1400 651 Gene3D Transferase(Phosphotransferase) domain 1 378 593 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1400 Lal-Chr23 14594767 14600903 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1400 113 648 Trihelix Transcription Factor Family AT1G70460 44.585 3.05e-146 439
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Lal23g1400 PK_Tyr_Ser-Thr 2.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1400 - - lang:109332805 845.114
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1400 23 14594767 14600903 Lal23g1400 23 14594767 14600903 ECH