Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1391 ATGAGAGTTCCCGTTTCCTCATCCCCACAGGCCAACCCAAAACCCACCAACGCAGCCCGCACCGTAGCCCTCCACGCCTCTCCTAACCACACCAACGATAACAACAATCAAGTCTTGTGCTACGAGCCCACCTCTGTCCTTGACCTGTGCCGGAGCCCGAGTCCTGGCACGGGCCAAGAAAAACCCACTGATCACTCTGTTGCTGTGTCCAACTCACAAGAGAGCCTGGAGATTGACGAACATGTATTGCATAATTTGGATTGGGATTCCATCATGAAGGACTTGGGATTGCAAGATGACTCAACCCCTCCCGTTTTGAAGACTATGCTCCATCCCAACCCATGTGACCTTCCTGAATTCCCACCACCCTTTGAAAACGCCACCGAATTCACCACCCTCTCTGACATGTACTCAAATCAAAACATGGGTTACAACTTCATAACCAACACAAATACCATGGACAATTTGGTTCATGAGTCTTACACCCAAAACACTACCAACAACAACGGCTTTGATTTCATTGAAGACCTTATTCGTGCAGCCGATTGCTTCGACAACAACCAGGCCCACGTGGCACATGTGATATTGGAGCGGCTCAATCAACGGCTACGATCTCCTGTAGGAAAACCACTCCACCGAGCAGCGTTTTACTTTAAAGAAGCGCTTCAATCCCTTCTCTCCGGTTCGAATCGAACTCTGAGGCTTTCATCGTTAGTGGAAATCGTTCATAGCATCAAAACCTTCAAGGCTTTCTCTGGAATCTCCCCGATTCCAATGTTCTCAATCTTCACCACCAACCAAGCACTTCTGGAAGCACTTCACCCTTCCTCCTTCATGCACGTCATCGATTTCGATATTGGTTTAGGGATTCAATACGCTTCTCTCATGATGGAGATCGCAGAAAAGCTTGATTCCTCTAAACTAAACTCGCCTCCGATGCTTAGAATCACCGCCGTCGTTCCTGAAGAATACGCGGTGGAGAGCCAATTGATTCGTGAGAATCTCAGCCAGTTCGCTCACGAACTCAGGATCCGTCTCCAGGTTGACTTTGTTCTGCTTCGCACCTTCGAGACGTTGTCATTTAAGGCGGTTAAATTCGTCGACGGAGAGAGGGCCGCTGTGCTGTTATCTCCGGCGATATTCCGTCGCCTCGGCTCAAACAACACAGCCGCGTTTTTAGCGGATGTCCGGAGTGTGTCACCCAGCGTGGTGCTCTTTGTGGACGGAGAGGGGTGGACGGATGCGGCGGCGGCTACTTCATTTCGGCGTGATGTGGTGAGCAGCCTGGAGTTCTACTCGATGATGCTGGAGTCGCTGGATGCCTCCGTGGCGGGAGGAGGAGGAGGTGGGGATTGGGTGAGGAGAATTGAGATGTTGCTGTTGCGTCCTAAGATATTGGCGGCGGTGGAGGGCGCCGGGAGGCGTGTTCCACCGTGGAGGGAAGCTTTTTACGGCGCGGGAATGAGGCCTGTTCAGTTAAGCCAGTTCGCTGATTTTCAAGCAGAGTGTTTGTTGGCCAAGGTACAAATCAGAGGCTTCCACGTTGCAAAACGCCATGCTGAGTTGGTGCTTTGCTGGCAGGATAGGGCAATGGTTTCCACGTCAGCTTGGCGCTGTTAG 1620 0.5148 MRVPVSSSPQANPKPTNAARTVALHASPNHTNDNNNQVLCYEPTSVLDLCRSPSPGTGQEKPTDHSVAVSNSQESLEIDEHVLHNLDWDSIMKDLGLQDDSTPPVLKTMLHPNPCDLPEFPPPFENATEFTTLSDMYSNQNMGYNFITNTNTMDNLVHESYTQNTTNNNGFDFIEDLIRAADCFDNNQAHVAHVILERLNQRLRSPVGKPLHRAAFYFKEALQSLLSGSNRTLRLSSLVEIVHSIKTFKAFSGISPIPMFSIFTTNQALLEALHPSSFMHVIDFDIGLGIQYASLMMEIAEKLDSSKLNSPPMLRITAVVPEEYAVESQLIRENLSQFAHELRIRLQVDFVLLRTFETLSFKAVKFVDGERAAVLLSPAIFRRLGSNNTAAFLADVRSVSPSVVLFVDGEGWTDAAAATSFRRDVVSSLEFYSMMLESLDASVAGGGGGGDWVRRIEMLLLRPKILAAVEGAGRRVPPWREAFYGAGMRPVQLSQFADFQAECLLAKVQIRGFHVAKRHAELVLCWQDRAMVSTSAWRC 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1391 539 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 6 538 IPR005202 -
Lal23g1391 539 MobiDBLite consensus disorder prediction 1 35 - -
Lal23g1391 539 PANTHER SCARECROW-LIKE PROTEIN 15 6 538 - -
Lal23g1391 539 Pfam GRAS domain family 174 538 IPR005202 -
Lal23g1391 539 ProSiteProfiles GRAS family profile. 164 538 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1391 Lal-Chr23 14556234 14557853 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1391 76 538 GRAS Transcription Factor Family AT4G36710 55.556 4.69e-174 498
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal23g1391 GRAS 8.8e-85 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1391 - - gmx:100807470 728.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1391 23 14556234 14557853 Lal23g1391 23 14556234 14557853 ECH