Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1387 ATGGGAAAAGGAGCAGGCTGTGTTCCCAGTAAAAAGAAGACTAAATTTGTTACTGCCGATTCTCCACGCGCCACATCTGGTACATCTAGGAACGCGCCGATCCCTCTCGATGACAGCCACCACACTGACCAAACCTCTAACGCAATTCAAGAAACCGCGTCGTCGAATTCCGTCGCTGCGAAATTGAAGATCTTCATCGTGTTCTATTCCATGTACGGACACGTGGAAGGCTTGGCTAAGAGGTTGAAGAAGGGAGTTGATGGCGTCGAAGGTGTGGAAGGTGTTTTGTATAGGGTTCCAGAAACTTTGCCAATTGAGGTGTTGGAGCAGATGAAAGCGCCGCCCAAGGATGACGCTATACCGGAGATAACGGCGGCGAAGTTGGCGGAAGCCGACGGATTATTGTTCGGGTTCCCGACGAGGTATGGATCCATGGCGGCGCAAATGAAAGGGTTCTTTGATTCGACGGGGCAGTTGTGGAAGGAGCAGAAGCTTGCAGGGAAGCCCGCTGGGTTCTTTGTCAGTACTGGTACTCAAGGAGGAGGACAAGAAACTACTGCTTGGACTGCAATAACTCAGCTGGCTCACCATGGAATGCTGTATGTTCCTGTTGGATATACATTTGGACCTGGAATGTTCAAGATGGACACCATTAGAGGAGGCTCTCCATATGGTGCTGGGGTGTTTGCTGGTGATGGAACAAGAGAACCAAGTGAAACAGAACTGGCACTGGCAGAGCATCAGGGCAAGTATATGGCTCTTGTAGTCCAGAAGCTTGCTTCTTGA 786 0.5038 MGKGAGCVPSKKKTKFVTADSPRATSGTSRNAPIPLDDSHHTDQTSNAIQETASSNSVAAKLKIFIVFYSMYGHVEGLAKRLKKGVDGVEGVEGVLYRVPETLPIEVLEQMKAPPKDDAIPEITAAKLAEADGLLFGFPTRYGSMAAQMKGFFDSTGQLWKEQKLAGKPAGFFVSTGTQGGGQETTAWTAITQLAHHGMLYVPVGYTFGPGMFKMDTIRGGSPYGAGVFAGDGTREPSETELALAEHQGKYMALVVQKLAS 261
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1387 261 Pfam NADPH-dependent FMN reductase 78 204 IPR005025 GO:0016491
Lal23g1387 261 ProSiteProfiles Flavodoxin-like domain profile. 64 252 IPR008254 GO:0010181
Lal23g1387 261 MobiDBLite consensus disorder prediction 1 52 - -
Lal23g1387 261 PANTHER FLAVODOXIN-RELATED PROTEIN WRBA-RELATED 12 260 - -
Lal23g1387 261 Gene3D - 59 261 IPR029039 -
Lal23g1387 261 SUPERFAMILY Flavoproteins 63 259 IPR029039 -
Lal23g1387 261 PANTHER NAD(P)H DEHYDROGENASE (QUINONE) FQR1-LIKE 2-RELATED 12 260 - -
Lal23g1387 261 TIGRFAM flav_wrbA: NAD(P)H:quinone oxidoreductase, type IV 63 259 IPR010089 GO:0003955|GO:0010181
Lal23g1387 261 MobiDBLite consensus disorder prediction 19 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1387 Lal-Chr23 14508929 14511223 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1387 K03809 - gmx:100811224 399.823
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1387 23 14508929 14511223 Lal23g1387 23 14508929 14511223 ECH
Lal16g0084 16 507391 510794 Lal23g1387 23 14508929 14511223 LSH
Lal15g0135 15 952890 955135 Lal23g1387 23 14508929 14511223 LSH