Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1386 ATGACTGGCGGTGGTTCATCAGGTCGATTACCTACTTGGAAGGAGAGGGAGAACAACAAGCGCAGAGAACGAAGACGCAGAGCAATAGCTGCTAAGATCTATGCAGGTCTTCGAACTCAGGGGAACTTCAAGCTTCCTAAGCACTGCGACAACAACGAGGTTTTGAAAGCTCTCTGTGCCGATGCTGGTTGGATCGTAGAAGAAGACGGCACCACCTATAGAAAGGGATGCAAAAGAAGTGCGAGTGAGTTTGGAAGAACACAACCTGGTTGTTCTTCGATTCAGCCAAGCCCAACCGGGCCAAGCCCGCAATCCTCATCATTTCCAAGCCCGGTTCCATCTTACCATGCTAGTCCTACTTCATCTTCTTTCCCAAGCCCTTCTCGCATAGATCCAAACCCTTCTTCGTTTCTTCTACCATTTATCCACAACATGAATCTCCCACCTCTTAGGATATCAAATAGTGCCCCTGTTACTCCTCCTCTCTCTTCACCAACATCAAGAACCTCTTCAAAACGCAAAGCACATTTCGATTCACTCCCCAATACTAATGCTTCTTCTCTTAACCCATTTATACATCCTCTTTTTGCTGCTTCTGCTCCTTCAAGTCCTTCTCGCCGTCACCACCATGTTGGTACTTATACTATTCCGGAGCACGATGAGTCTGATGCTTCTACTCTTGACTCTGATCGATGGGTTAGTTTTCAGAATTCCCCTGCTCCTCCTTCACCTACCTTTAATCTTATGAACCCTGCAATCATGCACCACCACCAGCAGATGATTATTCCAAAGGATTCTTCTTCGGATATGCAATGGAGTGCAGGTAGTGAGAGAGGGAGAGGATCTGATTTTCACTTTGAGAATGGAAGTGTTAAGCCTTGGGAAGGTGAGAGAATACATGAGGTTGGGATTGATGATTTGGATCTTACACTAGGATTTGGAAAGGCTTAA 951 0.4606 MTGGGSSGRLPTWKERENNKRRERRRRAIAAKIYAGLRTQGNFKLPKHCDNNEVLKALCADAGWIVEEDGTTYRKGCKRSASEFGRTQPGCSSIQPSPTGPSPQSSSFPSPVPSYHASPTSSSFPSPSRIDPNPSSFLLPFIHNMNLPPLRISNSAPVTPPLSSPTSRTSSKRKAHFDSLPNTNASSLNPFIHPLFAASAPSSPSRRHHHVGTYTIPEHDESDASTLDSDRWVSFQNSPAPPSPTFNLMNPAIMHHHQQMIIPKDSSSDMQWSAGSERGRGSDFHFENGSVKPWEGERIHEVGIDDLDLTLGFGKA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1386 316 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 1 315 IPR033264 GO:0003700|GO:0006351|GO:0009742
Lal23g1386 316 MobiDBLite consensus disorder prediction 1 25 - -
Lal23g1386 316 MobiDBLite consensus disorder prediction 109 129 - -
Lal23g1386 316 MobiDBLite consensus disorder prediction 80 129 - -
Lal23g1386 316 Pfam BES1/BZR1 plant transcription factor, N-terminal 6 131 IPR008540 -
Lal23g1386 316 MobiDBLite consensus disorder prediction 85 101 - -
Lal23g1386 316 MobiDBLite consensus disorder prediction 152 182 - -
Lal23g1386 316 PANTHER BES1/BZR1 HOMOLOG PROTEIN 1 1 315 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1386 Lal-Chr23 14505561 14511223 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1386 9 316 BZR Transcription Factor Family AT1G75080 54.268 1.40e-85 259
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lal23g1386 BES1_N 3.3e-58 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1386 K14503 - gmx:100812095 340.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1386 23 14505561 14511223 Lal23g1386 23 14505561 14511223 ECH