Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1380 ATGAGTCACTTTCCTATAATCCCTGCCTTCATTTTCACCCTATTGATCTGCACCTTCTCTGTGATTGAGGGGCAGCAACCTTATATTGGTTTAGGCACAACAGCATGTTATAGAAAGGGTAACTCAAAATCAATCCGTGGTTACACTTGTAATGGTGCAAATCAAAGTTGCCAAGCTTACCTTACCTTCAGATCTCAACCCCTTTACAGTTCTGTTTCCAAAATATCTGCTTTGTTAAGTTCTGACCCATCCCAGCTTGCAGATATAAACTCAGTCTCCCTTAATCACACTTTTGAAACAAACAACCTAGTAATTGTTCCAATCAAATGTTCTTGTGCAAGTGAGTACTATCAGGCTAATACATCTTATGTGGTCCAGTATGCTGAAACACACTTTTTGATAGCTAGCAACACTTTTCAAGGTCTTTCAACATGTCAAGCTTTGCAGAATGAAAACCACAATCCCTGGAACATGTTCCAAGGTAGAGAACTTTTAGTTCCTCTTAGATGTGCTTGTCCAACAAAGAATCAAACTGAGAAAGGTATCAAGTATCTTTTAAGTTACTTAGTAAAAGAGGGTGATTCTGTTTCACTCATTAGTGAAAAATTTGGTGTCAAAACTGAGGCCACTCTTGAAGCTAATAATCTTTCTATGACAAATGCCATCATCTACCCCATCACTACTCTTCTAGTTCCCTTTCATGATAAGCCCTCAAATTCTGAAACCGTTTCTCAAGCTCCACCACCTACACTTCCCTATTCTTCCACCACAGATAAAAGCTCAAAGAAAAAGTGGGTGTATGCAGTTGTTGTTGTTGGAGTTATTGTCTTAATATTAGTTCTTTGTGCTATAATTTTCTATACACTACACCATAGAAAAATGAAAAATAAAAAAGATCATGTGACTGTTTCTGAGAGTTTGGGGGCAATTGAGAAATCACAAGGGAGGAAAAAAGAGGAAGAATCTAAAAAATTGTCAGAGATGATATCTGGCATAGCTCAATCATTCAAAGTGTATGGTTTTGAGGAATTACAGCATGCAACAGATAACTTCAGTCCAAGCTATTGTATTAAAGGATCTGTTTTTCGGGGTGTTATTAAAGGAGATTTGGCTGCAATTAAAAAGGTTGAAGGAGATGTGTCAAAGGAAATAGAGCTACTGAACAAAGTGAACCATGCTAATGTTATTCGCCTCTCTGGTGTTAGCTTCAATGAAGGTCATTGGTATCTTGTTTATGAGTATGCTGCTAATGGAGCCTTGAGTGAATGGATCTATTTCAACAATAACGTGGATGGGAAGTTTCTGAGTTGGATAAAAAGAATACAAATTGCATTTGATGTTGCCACAGGACTTGACTATCTTCATAGTTTCACTTCCCCTCCACATATCCATAAGGATCTAAAGAGTAGTAACATTCTTTTGGACCATGATTTAAGGGCAAAGGTTGCAAACTTGAGACTTGCTAGATCCTTGGAGGTTAAAGAAGGTCAGCAACTTCCTTTGACAAGGCATATTGTTGGGACAAGAGGTTACATGGCTCCAGAGTATTTGGAAAATGGTTTAGTATCTACAAAGCTTGATGTGTATGCATTTGGGGTGTTATTGCTGGAACTCCTCATTGGAAAAGAGGTTGCTGCTATATTGACAGAAGATAATAAGAATTTGTCACATGTTTTATGTGACATGGTTGGTGACAAAAATGACCAAGAGAAGGTGAAGGAGTTTATGGATCCTTCTCTGAAAGGAAATTATCCTTTAGAACTGGCTATGTTTGTAGTTGGAATGATTGATAATTGCATAGAAAAAGATCCAGAAAGTCGCCCACACATGTATGAGATTGTGCTATCTCTGTCTAGAACATTGAACTCTTCATTGAGTTGGGAAATGTCAGTGATATCTTAG 1902 0.3775 MSHFPIIPAFIFTLLICTFSVIEGQQPYIGLGTTACYRKGNSKSIRGYTCNGANQSCQAYLTFRSQPLYSSVSKISALLSSDPSQLADINSVSLNHTFETNNLVIVPIKCSCASEYYQANTSYVVQYAETHFLIASNTFQGLSTCQALQNENHNPWNMFQGRELLVPLRCACPTKNQTEKGIKYLLSYLVKEGDSVSLISEKFGVKTEATLEANNLSMTNAIIYPITTLLVPFHDKPSNSETVSQAPPPTLPYSSTTDKSSKKKWVYAVVVVGVIVLILVLCAIIFYTLHHRKMKNKKDHVTVSESLGAIEKSQGRKKEEESKKLSEMISGIAQSFKVYGFEELQHATDNFSPSYCIKGSVFRGVIKGDLAAIKKVEGDVSKEIELLNKVNHANVIRLSGVSFNEGHWYLVYEYAANGALSEWIYFNNNVDGKFLSWIKRIQIAFDVATGLDYLHSFTSPPHIHKDLKSSNILLDHDLRAKVANLRLARSLEVKEGQQLPLTRHIVGTRGYMAPEYLENGLVSTKLDVYAFGVLLLELLIGKEVAAILTEDNKNLSHVLCDMVGDKNDQEKVKEFMDPSLKGNYPLELAMFVVGMIDNCIEKDPESRPHMYEIVLSLSRTLNSSLSWEMSVIS 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1380 633 ProSiteProfiles Protein kinase domain profile. 301 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g1380 633 SUPERFAMILY LysM domain 186 232 IPR036779 -
Lal23g1380 633 SUPERFAMILY Protein kinase-like (PK-like) 334 617 IPR011009 -
Lal23g1380 633 ProSiteProfiles LysM domain profile. 186 231 IPR018392 -
Lal23g1380 633 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 9 631 - -
Lal23g1380 633 PANTHER LYSM DOMAIN RECEPTOR-LIKE KINASE 4 9 631 - -
Lal23g1380 633 Pfam LysM domain 188 232 IPR018392 -
Lal23g1380 633 Gene3D Transferase(Phosphotransferase) domain 1 416 629 - -
Lal23g1380 633 Gene3D Phosphorylase Kinase; domain 1 318 414 - -
Lal23g1380 633 CDD LysM 187 231 IPR018392 -
Lal23g1380 633 Gene3D LysM domain 171 246 IPR036779 -
Lal23g1380 633 SMART LysM_2 187 232 IPR018392 -
Lal23g1380 633 MobiDBLite consensus disorder prediction 237 258 - -
Lal23g1380 633 SMART serkin_6 355 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g1380 633 Pfam Protein kinase domain 374 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1380 Lal-Chr23 14474605 14476506 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1380 9 630 Receptor kinase-like Gene Family AT2G23770 42.031 1.80e-166 487
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lal23g1380 Pkinase 7.9e-36 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1380 - - gmx:100815842 845.499
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1380 23 14474605 14476506 Lal23g1380 23 14474605 14476506 ECH