Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1379 ATGGTTGCCTTCTTTATTCCATCATGTTCTTTGAGTCTTGTTCTTGCACTCATGTTGTTTTTCACAAATATCTCAGTTCAATCACAACAGATCAATGCAACAGATTTTTCATGCCCTGTGGATTCACCTCCTTCCTGTGAAACATATGTGACATACATTGCACATTCTCCAAATTTCTTGAGTGTGGTCAGCATATCTAACATATTTTATACAAGTCCTTTATCTATTGCAAGAGCTAGTAACTTAGAGGCTGAGGATAACACACTGATTCCAGACCAAGTCTTACTAGTACCTGTAACTTGTGGTTGCGTTGGAAAATATTCTTTTGCCAATATGTCCTATGAGATCAAGCTAGGTGATACCTACCAACTTGTTATTGAAACTATATATGAGAACCTCACGAATTGGCTTGTAGTGGCAGATTTAAACCCTGGTCTGGTTCCAACTTTGTTGACAGTAGGTGTTGAAGTAATATTCCCTCTATTCTGCAGGTGCCCTTCAAAGAACCAGTTGAACAAAGGGATAAAAAATTTGATTACTTATGTGTGGCAGCCTAATGATACTGTTTCCATTGTAAGTTCCAAGTTTGGTGCATCCTCGGCCGACATATTGAGTGAAAATAACTATGGTGAAAACTTCACTGCTGCAATCCACCAGCCAATTTTGATCCCAGTGACACAGTTGCCACATCTTAGTCAACCTGAACTTTCAAATGCAAGAAAGAGCAGCATTCATCTCATGCTTATAATTGGCATTAGCTTAGGGTGCATACTACTAGTTGCAGCTTTAGTAGTACTATTGGTGTATGTTTGTTATCTGAAAAAGAGGATATTGAAAAGGAAAGATTCTTCTGTTGAAACTGCAGATAGGCTACTTACTGGTGTTTCAGGTTATGTAAGTAAACCAACTGTGTATCAAATCGATGCAATTATGGAAGCAACCATGAACCTCAGTGATCTGTGCAAGATTGGGGAATCAGTGTACAAGGCCAAAATGGATGGTCGGGTTTTAGCTGTTAAAAAAGCCAAAGAGGATGTCTCAGAGGAGCTGAAGATTCTACAGAAGGTAAACCATGGAAATCTGGTGAAATTAATGGGTGTCTCTTCAGACAATGATGGAAATTTTTTCCTGGTCTATGAATATGCTGAAAATGGATGTCTTGATGACTGGATGTTTTTCAAGTCCTCATCAAACTCAATGGTCTCACTCACATGGAGCCAGAGGATAAGCATAGCTGTGGATATTGCCATGGGTCTGCAATATATGCATGAACATACTCATCCAAGAATAGTCCACAGAGATATCACAACAAGTAATATTCTTATTGACTCAAACTTTAAGGCCAAGATATCAAATTTCTCTATGGCCATAACTTCTACCAACCCTATGATGCCAAAAATAGATGTCTTTGCTTTTGGTGTGGTTCTGTTGGAGTTGCTTACTGGCAAGAAAGCCATAACAACCAAAACAAATGGTGAGGTGGTTATGTTGTGGAAGGATATTAGGAAAGTCTTTGATCTTGAAGAAGATAATAAAGAGGTGATGCTCCAAAGATGGATGGATCCTAAGATGGAGAACTTTTATCCAGTAGACTATGCTCTTCACTTGGCTTCCTTAGCAGTGAATTGCACAGCAGATAAGCCTCTGTCAAGACCAACCATGACAGAAATTGTTCTTACCCTCTCCCTTCTGGCTCAACCATCTCCTGCATCATTAGAGAGATCCTTGACTTCTTCTGGGTTAGATGTTGAAGCTACTCAAACAATTTCTCCCATAGAAGCTCGATGA 1788 0.3932 MVAFFIPSCSLSLVLALMLFFTNISVQSQQINATDFSCPVDSPPSCETYVTYIAHSPNFLSVVSISNIFYTSPLSIARASNLEAEDNTLIPDQVLLVPVTCGCVGKYSFANMSYEIKLGDTYQLVIETIYENLTNWLVVADLNPGLVPTLLTVGVEVIFPLFCRCPSKNQLNKGIKNLITYVWQPNDTVSIVSSKFGASSADILSENNYGENFTAAIHQPILIPVTQLPHLSQPELSNARKSSIHLMLIIGISLGCILLVAALVVLLVYVCYLKKRILKRKDSSVETADRLLTGVSGYVSKPTVYQIDAIMEATMNLSDLCKIGESVYKAKMDGRVLAVKKAKEDVSEELKILQKVNHGNLVKLMGVSSDNDGNFFLVYEYAENGCLDDWMFFKSSSNSMVSLTWSQRISIAVDIAMGLQYMHEHTHPRIVHRDITTSNILIDSNFKAKISNFSMAITSTNPMMPKIDVFAFGVVLLELLTGKKAITTKTNGEVVMLWKDIRKVFDLEEDNKEVMLQRWMDPKMENFYPVDYALHLASLAVNCTADKPLSRPTMTEIVLTLSLLAQPSPASLERSLTSSGLDVEATQTISPIEAR 595
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1379 595 ProSiteProfiles LysM domain profile. 179 223 IPR018392 -
Lal23g1379 595 Pfam Protein tyrosine and serine/threonine kinase 340 459 IPR001245 GO:0004672|GO:0006468
Lal23g1379 595 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 19 595 - -
Lal23g1379 595 Gene3D Phosphorylase Kinase; domain 1 293 381 - -
Lal23g1379 595 ProSiteProfiles Protein kinase domain profile. 285 564 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g1379 595 Gene3D Transferase(Phosphotransferase) domain 1 461 564 - -
Lal23g1379 595 ProSitePatterns Tyrosine protein kinases specific active-site signature. 430 442 IPR008266 GO:0004672|GO:0006468
Lal23g1379 595 SUPERFAMILY Protein kinase-like (PK-like) 301 561 IPR011009 -
Lal23g1379 595 Gene3D Transferase(Phosphotransferase) domain 1 382 460 - -
Lal23g1379 595 PANTHER SERINE/THREONINE RECEPTOR-LIKE KINASE NFP 19 595 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1379 Lal-Chr23 14470818 14472605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1379 10 568 Receptor kinase-like Gene Family AT2G33580 30.015 1.81e-68 233
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Lal23g1379 PK_Tyr_Ser-Thr 7.1e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1379 - - gmx:102669100 837.41
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1379 23 14470818 14472605 Lal23g1379 23 14470818 14472605 ECH