Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1355 ATGTCGTTTTCGTTGTTCTCGACGCCGCAGCAACCGCAACAACAAAGTCTGTTTCAGCCGCAGCAACAACAACAACAACAGTCCCCTTTCCAGCAAACGAATAGTTTTTTCCCACAACAACAACAGCAATTTCAACCACAGCAGCAGCAACAGCAACAGCAACAACAACAAAATCAGATGTTTCTGTTCACTAATGAGAAAACTCCGGCCAGTTATAGCACCAATTGGGCCGATCTACATCCTGATTCTCAAAAGTTTCTCCTTCAGATCGAGGAGCGGATATTGGAGTATAGAGATGAAAGCCAGAGATTAGATCAGTCTAGTCGTCTTTATGATTCTTCTGTTTCTATTGATGGATTTGAGGTCGATGCTTCCCATATTGTCCAGGAACTGGGTGGAACTGGCACTGCTATGGAACGACAGAAAGCTTTGCTGCATGAACTGATGTCTGTTGTTAAGGATATGTTACGCAACACAGAGGTTGCTGTTCGTTCCTTTATGATGCTACGTCCAAGGTTCCTTCATCCCAGTGGGGGTGCATCAAGTGCCACTGCCCCGTCACAGACTCCTGGAGCGACACAAAGTTCAAGTAACCAACCACCAGCTACATCTATAGTGCCGGTTTTTGATTTCTACAGTGGTCTTCCAAGGAAACCGTCGCCCTTTTTACAGCAGACAGTTTTAAGATTCGAGAAGTATATTGGTGAATGCCATCAGTGGATTGAAGAGTTGGAGCAGTTGCTTCTCTTAGACTCTGGGAGAAATGCTTCCAGCAATGGATCTTCATTATTGCAATCTCTTCCCAAAGTCATGACAAATGTGCATGACTTTTTTGTTCATGTGGCTGCGAAGGTGGAGAGTATTCACCAGTATATTGAATCTATGAAATCAGCATACCTAGCTGATCAGCGCCGCCGTGGTGAGGTAAATGATCCATTTCTAGAGGCTGACCGGCGAGAAACTGCAAGACAAGAAGCTGCTTCAAAAAGAGTCCATCCAACATTGCATTTGCCTGCAAATTCACAACCCTCAACCCAAGTTGCTGGGTTGTTTTCTAGTTCAGGAACTCAAGGAGCATTGCCCGTCCCACAGACCTCTGCAGCACCTTCATCTTCATCATCATCATTATCATCATCATCAGGCAGTGGATTCTCTCTTTTTAGTACACCTTCTGCTCCATCTTCCTCTTTGTCTTTGTTTGCAACACCATCAACTCCTGCTCCAGGATCCTCTTGGTTCGCATCATCTGGGGCTGCAGCCCCATCCTCACTTTTTGGTTCTGCATCATCAGTACCTGGTCCTGCTTCAACTCCTTCGTTGTTTAGTAATACTGCTTCATTGTTTGGTTCAACTCCAGGTGCTGTGACAGGATCAGGGGCGAGCTTTGGACCTGGATCAAAAAATGCAAGGCCGAAATCCAGAACTGCTAGACGCTAA 1437 0.4565 MSFSLFSTPQQPQQQSLFQPQQQQQQQSPFQQTNSFFPQQQQQFQPQQQQQQQQQQQNQMFLFTNEKTPASYSTNWADLHPDSQKFLLQIEERILEYRDESQRLDQSSRLYDSSVSIDGFEVDASHIVQELGGTGTAMERQKALLHELMSVVKDMLRNTEVAVRSFMMLRPRFLHPSGGASSATAPSQTPGATQSSSNQPPATSIVPVFDFYSGLPRKPSPFLQQTVLRFEKYIGECHQWIEELEQLLLLDSGRNASSNGSSLLQSLPKVMTNVHDFFVHVAAKVESIHQYIESMKSAYLADQRRRGEVNDPFLEADRRETARQEAASKRVHPTLHLPANSQPSTQVAGLFSSSGTQGALPVPQTSAAPSSSSSSLSSSSGSGFSLFSTPSAPSSSLSLFATPSTPAPGSSWFASSGAAAPSSLFGSASSVPGPASTPSLFSNTASLFGSTPGAVTGSGASFGPGSKNARPKSRTARR 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1355 478 Coils Coil 87 107 - -
Lal23g1355 478 MobiDBLite consensus disorder prediction 177 202 - -
Lal23g1355 478 MobiDBLite consensus disorder prediction 180 202 - -
Lal23g1355 478 MobiDBLite consensus disorder prediction 410 436 - -
Lal23g1355 478 MobiDBLite consensus disorder prediction 1 57 - -
Lal23g1355 478 Gene3D - 218 308 - -
Lal23g1355 478 MobiDBLite consensus disorder prediction 453 478 - -
Lal23g1355 478 PANTHER NUCLEOPORIN P58/P45 NUCLEOPORIN-LIKE PROTEIN 1 3 458 IPR024882 GO:0005643|GO:0006913|GO:0008139|GO:0017056
Lal23g1355 478 MobiDBLite consensus disorder prediction 311 375 - -
Lal23g1355 478 MobiDBLite consensus disorder prediction 311 330 - -
Lal23g1355 478 MobiDBLite consensus disorder prediction 335 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1355 Lal-Chr23 14320094 14324326 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1355 13 478 NAC Transcription Factor Family AT4G37130 60.155 0.0 514
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1355 K14307 - gmx:100805204 615.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0204 16 1235301 1243343 Lal23g1355 23 14320094 14324326 LSH