Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1308 ATGGTTTATGTGGCCGGATTCACCACAGTGGTTGCAATCAATCAACGGTGGCCAATTCCGTTGTTATCAATTACACCAGATAGCAACGTTTCGACGCGCTACACGGTCGTATTTATGTATCGAAGTTGCAGAGAACATGGCTTCAGCACCGCCTCTGAATCAGCTTGGACAGATTTTCCCACAGATAACGCCTACGCGATGTTAGGAGTGTCTGAGAGCAGTTCATTTGCTGAGATCAAAGCTTCTTTTCGCAAATTGGCCAAAGAAACTCACCCTGACCTTGCTCAGTCAACGAACGATTCCACCGCGTCTCGACGCTTCGTGCAAATCCTCGCCGCATATGAGATTCTTTCAGATTCTCGAAAGAGGGCCCATTATGATATGTACTTATTGGCTCAGAAAAAACTCATGCAAAAGCAGAAACATTCGGGGCAGGGGTCGAAATTACACATATATGAATCGCACAATACATTCAAGGAGATGGAAGTTGTGGAATGGTTAAAGTGGTACAGGTTAGCTATAAATGATATTTTGTGTGAGAAGAGGGTGGTGGTTGGAACAGGATATTTTGATGTGCTTGAGAGAGATTTTTATTCAGCTATTTATGCAGCATACTATGGTCCTGACATTGATTCTTTGCCTTTGGAGTTTCTTCCTGAGTGTTTTGAGGCTGAGGAGAGGTCCTCTTGTGAAACTCCTGAGGTTTTGCACTTGGTTTCGGGACGTGATCTTTTCGGGATGGTTTGCCTTGTCAATGAGATTCCAGAGATATCATCTGCCACTAATGAAAAATTAGCTTCTTCCAGATCCTTCCATTCAGGCCCCTGCCAATCTATATTGAATATTCACAGGGACGCAGAAAGGCCAGATGATTTTGGAACTCATCAAGTTCACACCTCTAAACTTTCAAGTAATGTATCAGATGCATATAGAGATCTAGAGTTGCATGTCTATGGAAGAGTGGTTGCGACAGCTTCCAGGGTCCTACCTAGATGCTATCCTGGTGGGTTGGAGAAAGAAGATGCCGAAGATCACATTCACGTGTTTCTTAATTCAGACGAAGATCCCAAACATTTCGGCAGTGGCTTTTCGAAAAGTTACTTTGCAAATGGTGCAGTTGGAAGCAGCATTCATTTGGGAACCATATCTGGACTTGGGAGCAGTGCAGATGAAGGTTGTTGTTATGTTCATAATAGCCGTGGTGTAAAGACCCATGCGATTATGAAACATAGGACATTGATGGTGAAGCATATGCACTGGTATCAAGTCGGTGACGAAGTTTCTGTTTGTGAGTGTAGATGCACTAGAGCACGTTTACTACCAAGCAAATTTTGGCTATTTGAGCCTCGTTGTGGCTTCCATGACATAGGGGGTTGGTATATTGAGACATATGGCAAAGATAAAAAGGGCCGTACAATACCATCACAAAGGTTCTGGGATGGCTTGGATTATAGTGAGCAAGCTGACAGAAGACTTCATCCAGCAATGTATATGTTTGCTCTTGCGTATCGGACACTTGATCTTGAATATGCGAAAGTAAGCAAGAAAACATTCAGGAACACTGTCGGAGCTCAAGTGTTCAAAATTCTTCACTGGTGCAGGAAACTTGAGGTGTTGGTGTGCTCCTCAAGTACTGAAAGGAAAGTCATTAAAGCCTCTGTTAGTTTTGTTTACTTGGCTACAGAAACTTCAATTTTTTATCTACCTGGTGCTGGATATGTTGGTCAAACGCCAAATACTGAAGCCACTAGGTCGTGGTTGAAAATGAAAGAAATAAAGCATGTCACTGGTAACTTTAGTAGTTGA 1806 0.4291 MVYVAGFTTVVAINQRWPIPLLSITPDSNVSTRYTVVFMYRSCREHGFSTASESAWTDFPTDNAYAMLGVSESSSFAEIKASFRKLAKETHPDLAQSTNDSTASRRFVQILAAYEILSDSRKRAHYDMYLLAQKKLMQKQKHSGQGSKLHIYESHNTFKEMEVVEWLKWYRLAINDILCEKRVVVGTGYFDVLERDFYSAIYAAYYGPDIDSLPLEFLPECFEAEERSSCETPEVLHLVSGRDLFGMVCLVNEIPEISSATNEKLASSRSFHSGPCQSILNIHRDAERPDDFGTHQVHTSKLSSNVSDAYRDLELHVYGRVVATASRVLPRCYPGGLEKEDAEDHIHVFLNSDEDPKHFGSGFSKSYFANGAVGSSIHLGTISGLGSSADEGCCYVHNSRGVKTHAIMKHRTLMVKHMHWYQVGDEVSVCECRCTRARLLPSKFWLFEPRCGFHDIGGWYIETYGKDKKGRTIPSQRFWDGLDYSEQADRRLHPAMYMFALAYRTLDLEYAKVSKKTFRNTVGAQVFKILHWCRKLEVLVCSSSTERKVIKASVSFVYLATETSIFYLPGAGYVGQTPNTEATRSWLKMKEIKHVTGNFSS 601
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1308 601 SMART dnaj_3 62 122 IPR001623 -
Lal23g1308 601 CDD DnaJ 63 119 IPR001623 -
Lal23g1308 601 PANTHER CHAPERONE DNAJ-DOMAIN SUPERFAMILY PROTEIN 34 536 - -
Lal23g1308 601 SUPERFAMILY Chaperone J-domain 55 130 IPR036869 -
Lal23g1308 601 Pfam DnaJ domain 63 127 IPR001623 -
Lal23g1308 601 ProSitePatterns Nt-dnaJ domain signature. 107 126 IPR018253 -
Lal23g1308 601 ProSiteProfiles dnaJ domain profile. 63 130 IPR001623 -
Lal23g1308 601 PRINTS DnaJ domain signature 65 83 IPR001623 -
Lal23g1308 601 PRINTS DnaJ domain signature 83 98 IPR001623 -
Lal23g1308 601 PRINTS DnaJ domain signature 102 122 IPR001623 -
Lal23g1308 601 Gene3D DnaJ domain 52 149 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1308 Lal-Chr23 14020367 14025329 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1308 65 129 C2H2 Transcription Factor Family AT1G74250 41.176 1.72e-08 55.5
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1308 23 14020367 14025329 Lal23g1308 23 14020367 14025329 ECH