Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1296 ATGGACAACAATTGTTGTAATTCTCTCAGCAAAGCCAAGAATTTCACTCCAACAGCACCTCCTCTACCTCCACCATTCGTTTGTTTTCCTAAGCTTGCAGTGAAGAATAATGCAGCATCAATAGGGCGCAACTCTGTCTTTTCAGCCACAAAAGACATGTGGGAACGTCTTTTCAATGAAGGTTATGAAGCTGATATTTGCATCAATACTGAAAACGGTGGTACTATTTATGCTCACTCTAATATTCTTGGCATGGCTTCTCCAGTAATAAGAGGCATGCTGAAGCAAGCTGACCGTCATGACTGTTGGCGATCAATCTCAATCTCCGGGGTTCCACATGATGCTGTTCGGGCTTTTGTTCGATTCCTTTATGAGAAAGAAGAAATGGAGGAATTCGTCCTACCTTTGTTAGTGTTGTCACATGTATTTGTGGTACCTCACTTGAAGCGCGAATGTGAGCAGAAGCTAGAGTTGGGTTTACTGACCATAGATAATGTAGCTGATGTATTTCAACTTGCATTACTGTGTGATGCTCCCCGACTCAACCTCATTTGTCACCGTATGATACTAAAAAATTTCAAAGCTGTTTCTAAGTCAGAAGGATGGAAAGCAATGAAGCAGAGCCATCCTGCTTTAAAAAAGGAACTCGTTATGTCCTTGATGGAAGAAGAAAATGCAAAAAGTGAGAGGCACAGAAAAATCAATGATAGGAAGACCTATCTTCAATTATATGAGGCAATGGAAGCTCTTGTTCACATTTGTAGAGATGGTTGTAGAACTATTGGTCCGCGTGATAAAGACTTCAAAGCAAACCAGCCATGTAAATATACAGCCTGCAAGGGACTAGAATTGCTTGTTCGTCATTTTGCTGGCTGCAAGGCAAGAGTGCCAGGAGGTTGTGTTCATTGCAAGAGGATGTGGCAGCTTTTGGAGCTACACTCCAGACTTTGTGCTGATCCAGATTTTTGCACAGTTCCTTTGTGCAGGAACTTTAAGAAGAGAATATCAACACAAAGCAAGAAAGAGGAAATTAGATGGAAAATATTGGTTGAAAAGATCTTGAGAACAAAAGGCATTGGAATAGCACCATGCTTTCAGCCACAATAG 1107 0.4128 MDNNCCNSLSKAKNFTPTAPPLPPPFVCFPKLAVKNNAASIGRNSVFSATKDMWERLFNEGYEADICINTENGGTIYAHSNILGMASPVIRGMLKQADRHDCWRSISISGVPHDAVRAFVRFLYEKEEMEEFVLPLLVLSHVFVVPHLKRECEQKLELGLLTIDNVADVFQLALLCDAPRLNLICHRMILKNFKAVSKSEGWKAMKQSHPALKKELVMSLMEEENAKSERHRKINDRKTYLQLYEAMEALVHICRDGCRTIGPRDKDFKANQPCKYTACKGLELLVRHFAGCKARVPGGCVHCKRMWQLLELHSRLCADPDFCTVPLCRNFKKRISTQSKKEEIRWKILVEKILRTKGIGIAPCFQPQ 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1296 368 SMART BTB_4 64 160 IPR000210 GO:0005515
Lal23g1296 368 Gene3D - 161 234 - -
Lal23g1296 368 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 4 366 IPR044513 -
Lal23g1296 368 SUPERFAMILY TAZ domain 236 336 IPR035898 -
Lal23g1296 368 Pfam TAZ zinc finger 244 328 IPR000197 -
Lal23g1296 368 SUPERFAMILY POZ domain 44 156 IPR011333 -
Lal23g1296 368 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 4 4 366 - -
Lal23g1296 368 ProSiteProfiles BTB domain profile. 64 127 IPR000210 GO:0005515
Lal23g1296 368 Gene3D TAZ domain 235 356 IPR035898 -
Lal23g1296 368 SMART TAZ_2 237 329 IPR000197 -
Lal23g1296 368 CDD BACK 162 222 - -
Lal23g1296 368 Gene3D Potassium Channel Kv1.1; Chain A 43 159 IPR011333 -
Lal23g1296 368 Pfam BTB/POZ domain 56 156 IPR000210 GO:0005515
Lal23g1296 368 ProSiteProfiles Zinc finger TAZ-type profile. 234 331 IPR000197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1296 Lal-Chr23 13957669 13963530 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Lal23g1296 BTB 3.9e-12 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1296 - - lja:Lj2g3v1968190.1 571.237
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1296 23 13957669 13963530 Lal23g1296 23 13957669 13963530 ECH
Lal15g1311 15 15032691 15036734 Lal23g1296 23 13957669 13963530 LSH