Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1292 ATGGATACTTTGTTTAGACTTGTTAGTTTTCAACAACACCAACAACAACAACAACTACAAGCCGATAATCAATCCCTAAACTCCACCACAAGCAGAACAACAACATCTAGCAGCTCTAGATCCTCTAGACAACAACAAAACTATCACTTCCAACAAGATCAAGACGAAGAATGCTTCAACTTTTTCATGGATGATGAAGACCTTTCCTCGTCTTCTTCTAAGCACTATTATCCCTATCAACCCCACCACCCTCCTTCCACTACAACCACCACCACCACCACTACCACCACCACACCCACCCCTGATAACTTCTCCTTCTCACCCTCCCGCAATGACTTCAACTTCGAATTCTCTGGCAAGTGGGCGCATGATATCCTCCTTGAAACTGCACGTGCCATTGCGGAGAAGAATAGCGCACGTGTCCAACAACTCATGTGGATGCTCAACGAGTTAAGCTCTCCTTACGGTGATACAGATCAGAAGCTTGCTTCCTATTTCCTCCAAGCTTTGTTCAGCCGTATGAACGAAGCTGGAGATAGAACTTATCGCTCTTTAACTTCTGCATCGGAGAAAACATGTTCATTCGAATCAACAAGAAAAACTGTTTTGAAGTTCCAAGAAGTTAGCCCTTGGACTACCTTTGGACACGTTGCGTGCAATGGCGCAATCTTAGAAGCCTTAGAAGGGGAACCAAAGTTGCATATAGTTGATATTAGTAACACATATTGCACTCAATGGCCTACTCTATTTGAAGCATTGGCTACTCGGAACGATGACACTCCCTACCTCCGTTTAACAACGGTTGTTACTACCAGGCCTGGTGGCTCGATCGTGGCGGTGCAAAAAGTCATGAAGGAAATAGGTACCAGGATGGAGAAATTCGCGAGGCTCATGGGCGTTCCTTTTAAATTCAATGTGATCCATCATGCTGGTGATCTTTCTACCTTGGATTTCAGCGATTTGGATATTAAGGATGATGAGGCGTTGGCGATTAACTGCGTCAACGCTTTGCATTCGATCACGGGCATTGGTAACGCCCGTGAACTGTTCATATCTTCATTGAGGAGGTTACAACCTAAGATAATCACGGTGGTGGAAGAGGAAGCTGATTTGGACGTTGGATTCGATGGGTTTGAGTTTGTAAAAGGTTTTCAAGAATGCTTGAGATGGTTTAGGGTTTACTTTGAAGCTTTAGATGAGAGCTTTCCGAGGACGAGCAACGAGCGCTTGATGCTGGAGCGTGCGGCGGGGAGAGCGGTGGTTGAATTGGTTGCTTGTTCTCCGGCAGACTCGGTGGAGCGGCGTGAAACAGCAGCGCGGTGGTCGCAGCGTCTGCATGGAGGTGGGTTAAATACAGCGCCGTTTAGTGATGAGGTTTGCGATGACGTGAGAGCGCTTCTGAGGAGGTACAAGGAAGGTTGGTCAATGACACCGTGCTCCGACGCCGGAATATTCTTGTCGTGGAAGGAACAGGCGGTGGTGTGGGCCAGTGCATGGAGACCTTGA 1506 0.4721 MDTLFRLVSFQQHQQQQQLQADNQSLNSTTSRTTTSSSSRSSRQQQNYHFQQDQDEECFNFFMDDEDLSSSSSKHYYPYQPHHPPSTTTTTTTTTTTTPTPDNFSFSPSRNDFNFEFSGKWAHDILLETARAIAEKNSARVQQLMWMLNELSSPYGDTDQKLASYFLQALFSRMNEAGDRTYRSLTSASEKTCSFESTRKTVLKFQEVSPWTTFGHVACNGAILEALEGEPKLHIVDISNTYCTQWPTLFEALATRNDDTPYLRLTTVVTTRPGGSIVAVQKVMKEIGTRMEKFARLMGVPFKFNVIHHAGDLSTLDFSDLDIKDDEALAINCVNALHSITGIGNARELFISSLRRLQPKIITVVEEEADLDVGFDGFEFVKGFQECLRWFRVYFEALDESFPRTSNERLMLERAAGRAVVELVACSPADSVERRETAARWSQRLHGGGLNTAPFSDEVCDDVRALLRRYKEGWSMTPCSDAGIFLSWKEQAVVWASAWRP 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1292 501 MobiDBLite consensus disorder prediction 16 50 - -
Lal23g1292 501 ProSiteProfiles GRAS family profile. 113 500 IPR005202 -
Lal23g1292 501 Pfam GRAS domain family 124 500 IPR005202 -
Lal23g1292 501 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 500 IPR005202 -
Lal23g1292 501 PANTHER PROTEIN SHORT-ROOT 1 500 IPR030019 GO:0003700|GO:0005634|GO:0008356|GO:0009956|GO:0043565|GO:0048366
Lal23g1292 501 MobiDBLite consensus disorder prediction 72 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1292 Lal-Chr23 13938825 13940330 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1292 1 501 GRAS Transcription Factor Family AT4G37650 59.851 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lal23g1292 GRAS 9.2e-103 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1292 - - gmx:100797072 706.442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal23g1292 23 13938825 13940330 Lal23g1292 23 13938825 13940330 ECH
Lal16g0258 16 1549319 1550812 Lal23g1292 23 13938825 13940330 LSH