Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1287 ATGGCTTCTTTATCGAGCTATTGCATATCCCTTTCAAACCCTCCCAATTGTTTCGATTCTAACGACCTATGGTGCCTTTCTTATCACCCTCACTATTTCTACCCACAACCACGACTACTACAACCTGAGCTCAAGTTAAAATGTCGTTCCTCAAAACCCTTACCTGTCTCAAGGAAGTGTAATGTATTCAGCGAAGGAGTGAATGAGAACGTGGACGAAGAGAGCTTCAACTCGGTGAACGATAAACAATTCGTGCGTTGGTTCCGGGAGGCGTGGCCTTACTTGTGGGCCTATCGTGATGGAACTTTTGTTGTTATTATTTCCGGTGAAATTGTCGCTAGTCCTTACTTGGATCCCATTCTCAAGGATATAGCTTTCCTTCATCACCTGGGAATCCGGTTTGTTCTTGTTCCGGGGACCCATGTGCAAATAGACAAGCTTTTGAATGAGAGAGGGTGCCAGCCTAAGTATGTTGGTAGATATAGAATAACTGATGACGAATCTCTAGCTGCTGCAATGGAAGCTGCTGGGGGAATAAGATTGATGATTGAAGCAAAACTTTCTCCTGGGCCCTCCATATGCAATGTTCGTCGACATGGTGACAATAGCCGTTGGCATGAAGTCGGTGTCAGTGTTGCCAGTGGTAACTTTCTTGCTGCCAAGAAAAGAGGGGTTGTCAATGGTATTGATTTTGGGTCAACCGGGGAAGTTAAGAAAGTAGATGCATCTCGAATGCGTGAGAGGCTTGATGGTGGTTGTGTAGTTATTTTAAGCAACTTGGGCTACTCGAGCTCCGGAGAAGTATTAAATTGCAACACATATGAGGTTGCAACAGCTTGTGCCTTGGCTATAGGAGCCGACAAGTTAATATGTATTATAGATGGCCCAATACTTGACGAGAGTGGACGCCTAATTCATTTCTTGCCTCTTCAAGAAGCAGACATGTTAATACGTAAACGAGCTGCGCAAAGTGAAATAGCTGCTAACTATGTGAAAGCCGTTGATGATGAAATTCTAAACTCTCTTGAGCATAACCTTTTTAATGGGACAGTCCAACCTCCACCCAATGCAAAACCTTCTACAGACTGGAATAATGTAACCTTTCATAATGGTGTTGGTTTTGACAATGGGAATGGCCTAGGGTCTGGTGAGCAAGGATTTGCTATTGGAGGTCAAGAGAGGCTAAGTCGAATGAACGGTTATCTGTCAGAATTGGCAGCTGCAGCCTTTGTTTGTAGAGGTGGTGTTCAAAGAGTTCACTTGTTGGATGGAACTATTGGTGGAGTTTTGTTGTTGGAATTGTTTAAAAGGGATGGGATGGGAACAATGGTGGCTAGTGATCTTTATGAAGGCACTCGGATGGCACAGGTAACAGATATTTCTGGAATAAAGCAAATTATGCAGCCTTTGGAGGCATCTGGCATATTGGTTAAGAGGACTGATGAAGAGTTGCTAAAATCATTGGATAACTTTGTTGTTATGGAAAGAGAAGGTCAAATAATTGCTTGTGCTGCACTTTTTCCTTTTTTTGAAGAGAAGTGTGGAGAGGTTGCTGCCATTGCAGTATCTCCTGATTGTCGTGGCCAAGGACAGGGAGACAAGTTGCTTGATTATATGGAGAAGAAAGCATCAACTCTTGGATTAAATATGCTTTTCCTGCTTACTACTCGCACAGCAGATTGGTTTGTGAGGCGTGGGTTTTCAGAATGCTCAATTAATTGTATTCCGGAAAAGAGGAGGAGAATGATCAATCTGTCCCGGAATTCTAAATATTATATGAAGAGACTTCTACCAAATAGAAGTGGAATTACTGTTGGTAGAAAATTTACTTCAAATTAG 1839 0.4263 MASLSSYCISLSNPPNCFDSNDLWCLSYHPHYFYPQPRLLQPELKLKCRSSKPLPVSRKCNVFSEGVNENVDEESFNSVNDKQFVRWFREAWPYLWAYRDGTFVVIISGEIVASPYLDPILKDIAFLHHLGIRFVLVPGTHVQIDKLLNERGCQPKYVGRYRITDDESLAAAMEAAGGIRLMIEAKLSPGPSICNVRRHGDNSRWHEVGVSVASGNFLAAKKRGVVNGIDFGSTGEVKKVDASRMRERLDGGCVVILSNLGYSSSGEVLNCNTYEVATACALAIGADKLICIIDGPILDESGRLIHFLPLQEADMLIRKRAAQSEIAANYVKAVDDEILNSLEHNLFNGTVQPPPNAKPSTDWNNVTFHNGVGFDNGNGLGSGEQGFAIGGQERLSRMNGYLSELAAAAFVCRGGVQRVHLLDGTIGGVLLLELFKRDGMGTMVASDLYEGTRMAQVTDISGIKQIMQPLEASGILVKRTDEELLKSLDNFVVMEREGQIIACAALFPFFEEKCGEVAAIAVSPDCRGQGQGDKLLDYMEKKASTLGLNMLFLLTTRTADWFVRRGFSECSINCIPEKRRRMINLSRNSKYYMKRLLPNRSGITVGRKFTSN 612
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1287 612 Gene3D - 450 596 - -
Lal23g1287 612 CDD AAK_NAGS-ABP 83 444 IPR033719 -
Lal23g1287 612 CDD NAT_SF 491 553 - -
Lal23g1287 612 SUPERFAMILY Carbamate kinase-like 82 319 IPR036393 -
Lal23g1287 612 Hamap Amino-acid acetyltransferase [argA]. 83 596 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lal23g1287 612 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 450 598 IPR000182 GO:0016407
Lal23g1287 612 Pfam Acetyltransferase (GNAT) family 490 555 IPR000182 GO:0016407
Lal23g1287 612 Pfam Amino acid kinase family 103 315 IPR001048 -
Lal23g1287 612 TIGRFAM N-Ac-Glu-synth: amino-acid N-acetyltransferase 405 596 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lal23g1287 612 PANTHER AMINO-ACID ACETYLTRANSFERASE 61 603 IPR010167 GO:0004042|GO:0005737|GO:0006526
Lal23g1287 612 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 453 599 IPR016181 -
Lal23g1287 612 Gene3D - 82 449 IPR036393 -
Lal23g1287 612 SUPERFAMILY Carbamate kinase-like 398 446 IPR036393 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1287 Lal-Chr23 13912484 13918400 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Lal23g1287 AA_kinase 8.1e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1287 K14682 - gmx:100800925 922.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0262 16 1570742 1576629 Lal23g1287 23 13912484 13918400 LSH
Lal15g0198 15 1360302 1367008 Lal23g1287 23 13912484 13918400 LSH