Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1280 ATGCTCTCTGCTCTTTCTCCTAATCATCCTTTCCTCTCAAACCCATTCTCTACGGTGTTCCACAGCGGTTTCACGCCGTGGGATTGCCATGATCTTTTGCTATCCAAACCCACCAGCCCGAAGCCAGTTACTTCAAGCACAGGCTCTGACGACCCCGACCAAACCCATGCAAAAGAAAAACCGGACTCAGATGACTCGAACCGTGGCATGGCCATTGTAGGGGAGCGTAAGCGGAGGCGAATGATATCGAACCGGGAATCGGCCAGGAGGTCACGCATGCGTAAACAAAGGCATGTTGAGAACTTACAGAAGAAGTTGAACCTGTTTAGGGTTGAAAACAGGGAGCTGAATACTCGGTTGCAGTTCCTACTGAACCACTGTAACTGCGTACAAACCGAAAATGATTGGCTCTGGTCCGAGCGAACCTTGCTCTGTCAAAAACTTTCCAGCATAAGTCAATTTATGGTTTTCCAACAACTCCAACCCTTCTCCTCTTCATGGCCATGCAATAATCTCACAGTGGAATAA 528 0.4848 MLSALSPNHPFLSNPFSTVFHSGFTPWDCHDLLLSKPTSPKPVTSSTGSDDPDQTHAKEKPDSDDSNRGMAIVGERKRRRMISNRESARRSRMRKQRHVENLQKKLNLFRVENRELNTRLQFLLNHCNCVQTENDWLWSERTLLCQKLSSISQFMVFQQLQPFSSSWPCNNLTVE 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1280 175 MobiDBLite consensus disorder prediction 52 89 - -
Lal23g1280 175 MobiDBLite consensus disorder prediction 38 92 - -
Lal23g1280 175 SMART brlzneu 72 136 IPR004827 GO:0003700|GO:0006355
Lal23g1280 175 CDD bZIP_plant_GBF1 77 128 IPR045314 GO:0003700|GO:0006355
Lal23g1280 175 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 79 94 IPR004827 GO:0003700|GO:0006355
Lal23g1280 175 Coils Coil 85 119 - -
Lal23g1280 175 Pfam bZIP transcription factor 76 132 IPR004827 GO:0003700|GO:0006355
Lal23g1280 175 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 74 123 IPR004827 GO:0003700|GO:0006355
Lal23g1280 175 PANTHER BZIP TRANSCRIPTION FACTOR 26 172 - -
Lal23g1280 175 SUPERFAMILY Leucine zipper domain 76 127 IPR046347 GO:0003700|GO:0006355
Lal23g1280 175 Gene3D - 74 131 - -
Lal23g1280 175 PANTHER BZIP TRANSCRIPTION FACTOR 44 26 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1280 Lal-Chr23 13878253 13878780 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1280 4 161 bZIP Transcription Factor Family AT2G22850 33.014 3.48e-27 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lal23g1280 bZIP_1 1.1e-10 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1280 - - lang:109332688 248.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal15g0202 15 1393228 1393704 Lal23g1280 23 13878253 13878780 LSH