Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1273 ATGCGTCTCTTACTATTCCTTCTCCTCCTTCATTTCTACCACTCATTTTCTCACTCTACACCTATCTCTCAGTACCGTGCCCTTCTCTCTCTTAAGTCTTCTTTCATCGATTCCACCCCTCCCGTTCTCTCCTCCTGGAACACCTCCACCGACCACTGTTCCTTCTCCGGCATCACTTGCGATTACCGCCGACACGTCATTTCCCTCAACCTCACCGGACTCAGCCTTTCTGGTACTCTCTCCGGCGACGTCGCATATCTCCCATTCCTCTCCATTCTCTCCCTTGCAGACAACAAGTTCTACGGTTCTCTCCCTCCTCAACTCTCTGCCCTTTCTGGCCTCCGTTTTCTTAACCTCTCCAACAATTTCTTCAACGGCTCCTTCCCTTCCGAGCTCTCTGTTCTCAAGAATCTTGAGGTTCTTGACCTTTACAACAACAACATGACCGGAGACCTTCCTCTCGCCGTGACGGAGATGGTGAATCTGCGGCATTTGCATCTCGGAGGTAACTTCTTCTCCGGTCAGATCCCACCCGAGTACGGACGGTGGGAGCGTATTAACTACCTCGCTGTCTCCGGTAACGAGCTTGAGGGCACAATCCCGCCGGAAATCGGAAACCTCACCAGTCTCCGGGAGCTCTACATCGGGTACTACAACACCTATACCGGCGGCATTCCGCCGGAGATTGGAAACCTATCCGAACTTGTGAGACTCGACGCCGCTTACTGTGGACTCTCCGGAGAGATCCCGGCGGAGATTGGAAAGCTTCAAAAGCTAGACACTCTGTTTCTTCAAGTGAATGCGCTTTCAGGAACACTAACACCAGAACTAGGGAACTTGAAGAGCCTCAAGTCCATGGATTTATCTAATAACATGCTATATGGTGAAATACCTGAGAGTTTTAAAGAGCTAAAAAATATAACACTATTGAACTTGTTCAGAAATAAACTTCACGGAGCGATTCCTGAGTTTATAGGAGAGTTGCCATCTTTGGAAGTGGTGCAGCTTTGGGAGAATAACTTCACTGGGAGAATTCCAGAAGGGTTAGGGCAAAATGGGAAACTCACATTGGTTGATCTTTCTTCAAACAAGTTAACTGGGACTTTACCTCCTGATATGTGTAATGGGAATAGTCTTCAGACTTTGATAGCTTTGGCTAATTTTCTCTTTGGTCCTATCCCTGAATCACTTGGAAGATGTGAATCTCTTAATAGGATTCGAATGGGAGATAATTTTCTCAATGGTTCAATTCCAAAAGGCCTTTTTGGACTTCCAAAATTGACCCAGGTTGAGCTTCAGGGTAATTATCTCACTGGTAGTTTTCCTGAGGAGGATTCAGTTTCTGTTAATCTTGGTCAGATTACTCTCTCAAATAATAACCTTTCGGGGCCATTGCCACCCACCATTGGTAACTTCTCTAGTGTGCAAAAATTACTCCTTGATGGGAATAGGTTCTTTGGTCCAATCCCTCCTCAAATTGGCAAGTTACAGCAGCTCTCGAAGATCGATGTTAGTAACAACAGGCTTTCAGGTCCTATTGTCCCAGAAATCAGTCGATGCAAGTTGTTAACATTCATTGATCTTAGCCGTAATGAGCTATCTGGTGAGATCCCAAAAGAGATCACCGGTATGAGGATATTAAACTATTTGAATATTTCTAGAAATCATCTAGTTGGTACCATTCCCGTGTCAATATCCTCTATGCAAAGTTTAACTTCTATTGATTTTTCATATAACAATCTATCTGGTTTGGTTCCTGGTACTGGTCAATTTAGCTACTTCAATTACACGTCTTTCGTTGGCAACCCTGACCTTTGTGGTCCATATTTGGTTCCATGCAAGGGCGGGGTTGGCAATGGTGCTCAACCTCATGTCAAAGGTCCACTATCTTCTTCTTTCAAGCTCCTATTGGTTATTGGGTTGCTTGTATGCTCCATTGCATTTGCTGTTGCAGCTATATTTAAGGCTCGGTCGCTGAAGAAGGCCAGTGATGCTCGTGCGTGGAAATTAACAGCATTCCAACGTTTAGACTTCACTGTTGATGATGTTTTGGATTGCTTGAAGGAAGACAACATAATAGGGAAAGGAGGTGCTGGCATTGTGTACAAAGGTGCAATGCCTAATGGGGATCATGTTGCTGTGAAAAGGCTTCCAGCAATGAGCAGAGGCTCTTCACATGATCATGGATTCAATGCTGAGATTCAGACATTGGGGCGAATTCGACACAGACACATTGTTAGGCTATTGGGTTTCTGTTCAAACCATGAGACAAATCTTTTGGTGTATGAATACATGCCTAATGGAAGTTTAGGTGAAATTCTTCATGGTAAGAAAGGGGGGCATTTGCGTTGGGACACCAGGTATAATGTTGCTGTGGAGGCTGCTAAGGGGCTTTGTTATTTACACCATGATTGTTCGCCACTCATCCTCCATCGAGATGTAAAATCAAACAATATCCTTCTTGATTCCAACTATGAAGCCCACGTTGCTGATTTTGGGCTTGCCAAGTTCCTTCAAGATTCTGGAACTTCTGAATGTATGTCTGCTATTGCCGGTTCCTATGGATACATAGCTCCAGAGTATGCCTACACACTGAAAGTAGATGAGAAGAGCGATGTATACAGCTTTGGTGTGGTTCTCTTAGAGCTTATAACGGGCAGGAAACCAGTTGGAGAATTTGGTGACGGTGTGGACATTGTGCAATGGGTCAGGAGAATGACAGACTCTAACAAGGAAGGAGTTCTAAAAGTTCTTGATGCTAGACTTCCCTCCGTTCCCCTTGATGAGGTCATGCATGTCTTCTATGTAGCCATGCTGTGTGTTGAAGAACAGGCAGTAGAGCGACCAACAATGCGTGAAGTTGTCCAAATTCTGACCGAGTTTCCAAAGCCACCAGGCTCCAAACAAGGAGATTTAACAATTACTGAGTCCTCTTTGTCATCATCAAATGCCTTAGAGTCTCCAACCACAGCCTCTAAAGATAATCAGCAACCCCCTCAATCCCCACCACCTGATCTTCTTAGCATCTGA 3030 0.4492 MRLLLFLLLLHFYHSFSHSTPISQYRALLSLKSSFIDSTPPVLSSWNTSTDHCSFSGITCDYRRHVISLNLTGLSLSGTLSGDVAYLPFLSILSLADNKFYGSLPPQLSALSGLRFLNLSNNFFNGSFPSELSVLKNLEVLDLYNNNMTGDLPLAVTEMVNLRHLHLGGNFFSGQIPPEYGRWERINYLAVSGNELEGTIPPEIGNLTSLRELYIGYYNTYTGGIPPEIGNLSELVRLDAAYCGLSGEIPAEIGKLQKLDTLFLQVNALSGTLTPELGNLKSLKSMDLSNNMLYGEIPESFKELKNITLLNLFRNKLHGAIPEFIGELPSLEVVQLWENNFTGRIPEGLGQNGKLTLVDLSSNKLTGTLPPDMCNGNSLQTLIALANFLFGPIPESLGRCESLNRIRMGDNFLNGSIPKGLFGLPKLTQVELQGNYLTGSFPEEDSVSVNLGQITLSNNNLSGPLPPTIGNFSSVQKLLLDGNRFFGPIPPQIGKLQQLSKIDVSNNRLSGPIVPEISRCKLLTFIDLSRNELSGEIPKEITGMRILNYLNISRNHLVGTIPVSISSMQSLTSIDFSYNNLSGLVPGTGQFSYFNYTSFVGNPDLCGPYLVPCKGGVGNGAQPHVKGPLSSSFKLLLVIGLLVCSIAFAVAAIFKARSLKKASDARAWKLTAFQRLDFTVDDVLDCLKEDNIIGKGGAGIVYKGAMPNGDHVAVKRLPAMSRGSSHDHGFNAEIQTLGRIRHRHIVRLLGFCSNHETNLLVYEYMPNGSLGEILHGKKGGHLRWDTRYNVAVEAAKGLCYLHHDCSPLILHRDVKSNNILLDSNYEAHVADFGLAKFLQDSGTSECMSAIAGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELITGRKPVGEFGDGVDIVQWVRRMTDSNKEGVLKVLDARLPSVPLDEVMHVFYVAMLCVEEQAVERPTMREVVQILTEFPKPPGSKQGDLTITESSLSSSNALESPTTASKDNQQPPQSPPPDLLSI 1009
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1273 1009 SMART LRR_typ_2 568 591 IPR003591 -
Lal23g1273 1009 SMART LRR_typ_2 87 111 IPR003591 -
Lal23g1273 1009 SMART LRR_typ_2 135 159 IPR003591 -
Lal23g1273 1009 SMART LRR_typ_2 353 376 IPR003591 -
Lal23g1273 1009 SMART LRR_typ_2 328 352 IPR003591 -
Lal23g1273 1009 SMART LRR_typ_2 280 303 IPR003591 -
Lal23g1273 1009 SMART LRR_typ_2 496 520 IPR003591 -
Lal23g1273 1009 PANTHER LRR RECEPTOR-LIKE KINASE FAMILY PROTEIN 3 999 - -
Lal23g1273 1009 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 3 999 - -
Lal23g1273 1009 Pfam Leucine Rich repeats (2 copies) 136 176 IPR025875 -
Lal23g1273 1009 SUPERFAMILY Protein kinase-like (PK-like) 681 958 IPR011009 -
Lal23g1273 1009 Gene3D Transferase(Phosphotransferase) domain 1 765 971 - -
Lal23g1273 1009 SMART serkin_6 687 957 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g1273 1009 Gene3D Phosphorylase Kinase; domain 1 654 764 - -
Lal23g1273 1009 Pfam Protein tyrosine and serine/threonine kinase 689 958 IPR001245 GO:0004672|GO:0006468
Lal23g1273 1009 Gene3D Ribonuclease Inhibitor 350 616 IPR032675 -
Lal23g1273 1009 Pfam Leucine rich repeat N-terminal domain 23 61 IPR013210 -
Lal23g1273 1009 SUPERFAMILY L domain-like 353 613 - -
Lal23g1273 1009 MobiDBLite consensus disorder prediction 970 996 - -
Lal23g1273 1009 ProSiteProfiles Protein kinase domain profile. 687 962 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g1273 1009 Gene3D Ribonuclease Inhibitor 19 83 IPR032675 -
Lal23g1273 1009 Gene3D Ribonuclease Inhibitor 84 349 IPR032675 -
Lal23g1273 1009 SUPERFAMILY RNI-like 68 389 - -
Lal23g1273 1009 MobiDBLite consensus disorder prediction 962 1009 - -
Lal23g1273 1009 ProSitePatterns Serine/Threonine protein kinases active-site signature. 809 821 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1273 Lal-Chr23 13815352 13819516 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1273 11 988 Receptor kinase-like Gene Family AT5G65700 79.108 0.0 1558
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Lal23g1273 PK_Tyr_Ser-Thr 7.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1273 - - gmx:547593 1696.79
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0843 16 5454948 5458459 Lal23g1273 23 13815352 13819516 LSH