Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1249 ATGGAGGAACGGTATGAGATATTAAGAGAAATTGGTTATGGTAATTTCGCAGTGACAAAGTTGGCCAAAGATAATAAGACAGGGGACCTTGTTGCTATCAAATTCATTCTAAGGGGTGAAAAGATTGATAAGAATGTTCAAAGAGAGATGATTAATCACCAATCTTTAAGCCATCCAAATATTATCAGGTTCAAAGAGGTATTTCTGACCCCTACTCATTTAGCTCTTGTCCTGGAATATGCTGCTGGTGGTGAACTCTTTGACAGGATATGCAACAATGGTCCATTTACTGAATACATGGTTCGTAAAGCAAGATTTTTCTTCCAGCAACTAATATCTGGAGTTGGTTACTGTCATTCCATGCAAATTTGTCACAGAGATCTTAAAATGGAAAACATTCTCTTGGATGGAAATCCAGTTCCTCTACTTAAAATTTGTGACTTTGGTTTCTCCAAGTCCAATTTACTTCACTCCCGACCAAAATCAACAGTCGGAACTCCTACCTATGTTGCCCCAGAAGTTTTTTTACGCCAGGAGTATGATGGAAAGGCTGCTGATGTTTGGTCATGTGGTGTGATTCTTTACACCATGTTAGTTGGAGCATACCCATTTGAAGATCCAGAAAATCCTAAAGATATCAGAAAGACAGTTCAAAGAATAATGAATGTTGAGTTCTCCATACCCAACAATGTAAGTCTTTCTACAGAGTGTAAAAATCTCCTCTCACTTATTTTTGTTGCTGATCCTGTTAAGAGGATCACAATATCAGGGATAAAACAGCACCCTTGGTTTGTGAAGAAAATGCATAAACAGATAATTGAGGCTAATAGTAAAGCTTATGGGGTAACAAAAAAATACCAACTAAGCCAAAGTGTTGGAGAAATCATGCGGATCATACAAGAGGCAAAGACACCATCCAAAGTTGTCACATAG 933 0.3783 MEERYEILREIGYGNFAVTKLAKDNKTGDLVAIKFILRGEKIDKNVQREMINHQSLSHPNIIRFKEVFLTPTHLALVLEYAAGGELFDRICNNGPFTEYMVRKARFFFQQLISGVGYCHSMQICHRDLKMENILLDGNPVPLLKICDFGFSKSNLLHSRPKSTVGTPTYVAPEVFLRQEYDGKAADVWSCGVILYTMLVGAYPFEDPENPKDIRKTVQRIMNVEFSIPNNVSLSTECKNLLSLIFVADPVKRITISGIKQHPWFVKKMHKQIIEANSKAYGVTKKYQLSQSVGEIMRIIQEAKTPSKVVT 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1249 310 SUPERFAMILY Protein kinase-like (PK-like) 3 271 IPR011009 -
Lal23g1249 310 ProSitePatterns Serine/Threonine protein kinases active-site signature. 123 135 IPR008271 GO:0004672|GO:0006468
Lal23g1249 310 ProSiteProfiles Protein kinase domain profile. 5 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g1249 310 Gene3D Transferase(Phosphotransferase) domain 1 81 271 - -
Lal23g1249 310 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Lal23g1249 310 PANTHER SERINE/THREONINE KINASE 3 306 - -
Lal23g1249 310 SMART serkin_6 5 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lal23g1249 310 PANTHER SUCROSE NONFERMENTING 1(SNF1)-RELATED KINASE 3 306 - -
Lal23g1249 310 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
Lal23g1249 310 Pfam Protein kinase domain 5 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1249 Lal-Chr23 13634299 13637083 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1249 4 264 CBL-interacting serine-threonine protein kinases AT5G35410 45.018 2.85e-65 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Lal23g1249 Pkinase 5.6e-71 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1249 K14498 - gmx:547790 448.743