Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1247 ATGAAACCACTGAGCTTGACCCCTTTGAATTTATTTTCTCAACAAGTTTCTTATCTTCCAAACATAGGAAATTCCAGTGTAATTAAGTCTGATCCTAGAAGTTCACAGATGACAATCTTTTATGGTGGGGAAGTTATTGTTTTTGATGATTGTCCAGCTGAGAAAGCCAAGGAGATTGTGTCCTTTGCCACCAAAGGAAAGTCCCAAATTCAGAACAACAATAACTTCACTTATACATTCACTCAGACCCACCCTTCATTTCCTGCTGCTACTTCCACTTCTCCATTTCCTTTTGATATGAATCTCATCCCTGACAGTAGCAACAATTTAGTTCAAGGGCACCACCCTCAAGCACCATCTAAACCTGTTGCTTGTGATCTACCACTTACTAGGAAAGCCTCACTGTATCGGTTCTTGGAGAAGAGAAAGGATAGAATTGCTGCTAGAACACCATATCAAACAAGCAGTCCAATAACAGCTCCTTATAAGCCAGCTGAATCCATGTCATGGCTGGTCTTGTCACCTCACTCCCCACAAAACAGATCTGAGAGTTGCTCTAATTTTGTTTAA 570 0.407 MKPLSLTPLNLFSQQVSYLPNIGNSSVIKSDPRSSQMTIFYGGEVIVFDDCPAEKAKEIVSFATKGKSQIQNNNNFTYTFTQTHPSFPAATSTSPFPFDMNLIPDSSNNLVQGHHPQAPSKPVACDLPLTRKASLYRFLEKRKDRIAARTPYQTSSPITAPYKPAESMSWLVLSPHSPQNRSESCSNFV 189
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1247 189 Pfam Jas motif 128 153 IPR018467 -
Lal23g1247 189 ProSiteProfiles Tify domain profile. 30 65 IPR010399 -
Lal23g1247 189 PANTHER PROTEIN TIFY 4A-RELATED-RELATED 7 173 IPR040390 -
Lal23g1247 189 SMART tify_2 30 65 IPR010399 -
Lal23g1247 189 PANTHER PROTEIN TIFY 10A 7 173 - -
Lal23g1247 189 Pfam tify domain 32 63 IPR010399 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1247 Lal-Chr23 13626548 13632376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1247 28 174 Tify Gene Family AT1G19180 34.899 9.81e-22 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Tify Lal23g1247 tify 7.2e-17 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1247 K13464 - gmx:100306332 209.92
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lal16g0302 16 1821764 1827263 Lal23g1247 23 13626548 13632376 LSH