Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1234 ATGTGCCGACAAAATTCTCACCGTTCTGGCGAGGAAGAAATTGAAGCTGATGAGAGCCTTTTGATTTACTGCAAGCCTGTTGAACTCTACAATATTCTCTACCGCCGTGCTCTTCATAATCCGTCTTTTCTTAGTAGATGTCTGCACTATAAAATAAGAGCAAGGCAGAAAAGGAGGTTGAGAGCAGGAGTTGTGATTTTCAACTATAGGGACTGCTACAACATGCTTCGGAAGACAGAAGTGACTGAAGACTTTTCTTGTCCATTTTGTTTGGTGCAGTGTGCAAGCTTTAAGAAAAAGGATTTCAAGGCGAAATATGTAAAGAAGGAACATGATCTAAAGGAAGTGAATTTAACAAAGCATTTAGTATTTGTGCAGGGTTTGCGGTTTCATCTTTGTTCATCACATGATCTATTCAACTTCGAATTCTGGGTGACTGAAGATTACCAAGCAGTGAATGTCTCTGTAAAAATTGATATATCGAGATCAGAGAATGTCGCAGATGGAGAAAATTCAAAATCAGAAACCTTCTTCTTCTGGTTGGTTAATTCAAGACCTCGAAAACGTAAGCGAAAGGACTCCACTCAAAATGAAAAGCGTGCCAGTGTAAAGTTCCTGGAGTTGGATTCACCAGAAGGCACACAGAACGGTTTTGTAGAGAAAAATGATGATACCCTCTTCTACAAAGGGGAGAATATGTCTGGAACGTCTTCTATTCAGAAGAATTTGCAGAATGGAGGTCAAGGTGGAGGGAAATTTGGTCCGGATCATCTTGGCAACATGGACTACCTGGAGCATGTCGCGTCAAGTTTCAACATTCCAGGTGTTCCAATTGCCATGCCCCAATCTTCTCGGGATCCTGAATGTAGTAAATCAGTACATAGAAGTGATCCTGCTGTGCCTCTTAAAACGAAGAAGTTAAGCATGGATCGATCAGACTCAAAAAATCGAATGCTCCTGCAGAAGAGACAGTTCTTTCATTCACACCGAGTTCAGCCTATGGCACTAGAACAAGTATTATCAGATCGTGATAGTGAAGATGAAGTTGATGATGACATTGCAGATCTTGAAGATCGAAGGATGCTTGATGATTTTGTGGATGTTTACAAAGATGAGAAACAGGTCATGCATCTCTGGAACTCTTTTATGAGGAAACAAAGGGTGCTGGCTGATGGTCATGTTCCATGGGCCTGTGAGGCATTTTCCAAGCTTCATCGAAAAGAGCTCATTTCATCTCCAGCTTTATTTTGGTGTTGGAGGTTATTCATGATCAAACTTTGGAATCATGGTCTTCTTGATGCCTGCACAATGAACAACTGCAGTATAATACTAGAGAGTCAGAAAAACGAGGGATCAGATACTGGCTAA 1368 0.4108 MCRQNSHRSGEEEIEADESLLIYCKPVELYNILYRRALHNPSFLSRCLHYKIRARQKRRLRAGVVIFNYRDCYNMLRKTEVTEDFSCPFCLVQCASFKKKDFKAKYVKKEHDLKEVNLTKHLVFVQGLRFHLCSSHDLFNFEFWVTEDYQAVNVSVKIDISRSENVADGENSKSETFFFWLVNSRPRKRKRKDSTQNEKRASVKFLELDSPEGTQNGFVEKNDDTLFYKGENMSGTSSIQKNLQNGGQGGGKFGPDHLGNMDYLEHVASSFNIPGVPIAMPQSSRDPECSKSVHRSDPAVPLKTKKLSMDRSDSKNRMLLQKRQFFHSHRVQPMALEQVLSDRDSEDEVDDDIADLEDRRMLDDFVDVYKDEKQVMHLWNSFMRKQRVLADGHVPWACEAFSKLHRKELISSPALFWCWRLFMIKLWNHGLLDACTMNNCSIILESQKNEGSDTG 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1234 455 MobiDBLite consensus disorder prediction 288 302 - -
Lal23g1234 455 PANTHER POLYCOMB GROUP PROTEIN 59 103 - -
Lal23g1234 455 PANTHER POLYCOMB GROUP PROTEIN 124 453 - -
Lal23g1234 455 PANTHER POLYCOMB GROUP PROTEIN 1 60 - -
Lal23g1234 455 MobiDBLite consensus disorder prediction 282 302 - -
Lal23g1234 455 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 1 60 - -
Lal23g1234 455 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 124 453 - -
Lal23g1234 455 PANTHER POLYCOMB GROUP PROTEIN EMBRYONIC FLOWER 2-RELATED 59 103 - -
Lal23g1234 455 Pfam VEFS-Box of polycomb protein 307 442 IPR019135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1234 Lal-Chr23 13545196 13568887 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1234 20 66 C2H2 Transcription Factor Family AT5G51230 63.830 3.07e-13 70.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1234 - - gmx:100807112 675.626