Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lal23g1227 ATGTGGAACGTGATGGAAGATGTAGCAATAATAGGAGGGTTAATAGGAGTCCAATTTATTTATGCAGGGAATGCTGTGTTGATGAGTTATGCTATGTCATTGGGTCTTACCTCACTTACCATTGTCATTTACACTTCCCTCTCTACTTTCTTTATTCTTTTTCCATTGGCTTTTTGTTTTGAAAGGACCATTTGGCCTGAAAAATGCAGTTTCAGCTTTATTACACAGCTGTTGCTTCTTTCTTTTGGAGGAATAGTTTTCCAGTCTTTTTTCCTCAAAGGAATCAATCTAACTTCGCCAGCAATGGGAACTGCAATGCCAAACATTGCCCCAGGTCTTATCTTCATCATCGCATGGGCTTTTGGGTTAGAGAAAGTGAACTTGAGAAACAGGTATAGTAAAGTAAAAATCTTAGGAACATTGCTTTGTGTATTGGGAGCTTTGACAATGAGCATTATGCAAAGCATTTCTGCTCCTGCAACTGAGAATGAGCCTACATTTGAATCATCATCAATGGCATCAGGTTTCATATTTGACAAGCAGAAGATAATGGGTTGCTTCTATCTCATGGTTTCTGTGTTCATTTTGTCAAGCAACATTGTCCTTCAGGCTTTTGCTCTTGGAGGATTTCCTGCACCAATGTCCTTGAGTGCAATAACATCATTGTTTGGGGCGTTCATTACTGCAGGTATTCAGTTAATTGAAGATCACAATGTGGAAACTGGTTGGCCACTTGTGAGTCTTGGAGACCTCATTGGATATTGTGTTCTGGCAGGTGCAGTGAGTGGAATATGCCTAAGCTTCAACGGTTGGGCACTTAAGAAGAGAGGGCCAGTGTTGGTGTCCATGTTTAGCCCCGTTGGCACAGTCTGCTCCATCATTTTCTCTTTTGTTACACTAGGAGACACTATTAATTTTGGAAGCATTGCAGGTATGTTCCTCATGTTCACTGGGCTCTACTTGGTTCTTTGGGCCAAAAGGAAAGAAAGCTATGCAAATGGAGATGGCCTAGAGAGTGAGTCTGATGTAGATAAACCTCTTTGA 1044 0.4109 MWNVMEDVAIIGGLIGVQFIYAGNAVLMSYAMSLGLTSLTIVIYTSLSTFFILFPLAFCFERTIWPEKCSFSFITQLLLLSFGGIVFQSFFLKGINLTSPAMGTAMPNIAPGLIFIIAWAFGLEKVNLRNRYSKVKILGTLLCVLGALTMSIMQSISAPATENEPTFESSSMASGFIFDKQKIMGCFYLMVSVFILSSNIVLQAFALGGFPAPMSLSAITSLFGAFITAGIQLIEDHNVETGWPLVSLGDLIGYCVLAGAVSGICLSFNGWALKKRGPVLVSMFSPVGTVCSIIFSFVTLGDTINFGSIAGMFLMFTGLYLVLWAKRKESYANGDGLESESDVDKPL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lal23g1227 347 Pfam EamA-like transporter family 14 151 IPR000620 GO:0016020|GO:0016021
Lal23g1227 347 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020|GO:0016021
Lal23g1227 347 PANTHER WAT1-RELATED PROTEIN 9 340 - -
Lal23g1227 347 SUPERFAMILY Multidrug resistance efflux transporter EmrE 50 152 - -
Lal23g1227 347 SUPERFAMILY Multidrug resistance efflux transporter EmrE 247 328 - -
Lal23g1227 347 PANTHER WAT1-RELATED PROTEIN 9 340 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lal23g1227 Lal-Chr23 13497293 13499482 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lal23g1227 3 340 Nodulin-like Gene Family AT5G47470 55.882 3.38e-131 378
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Lal23g1227 - - aprc:113870214 508.064